Query= MSMg01no086_a02.b1 MSMg01no086_a02.b1 CHROMAT_FILE:
MSMg01no086_a02.b1 PHD_FILE: MSMg01no086_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:34 2005
(400 letters)
>mm_chr10_88255620_88256419
Length = 800
Score = 750 bits (388), Expect = 0.0
Identities = 397/400 (99%)
Strand = Plus / Plus
Query: 1 gaacataaacacggatgccatacaaccgggtttaggtgacaatggctcttgcttgcacaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gaacataaacacggatgccatacaaccgggtttaggtgacaatggctcttatttgcacaa 260
Query: 61 ctgacaaaacatccagaaaggctctgggatggagaggtaggaggctgataggactgccca 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ctgacaaaacatccagaaaggctctgggatggagaggtaggaggccgataggactgccca 320
Query: 121 gaacaaacacatcatctactgaagcagatagagaagcgtgtctacctcatttgcccacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacaaacacatcatctactgaagcagatagagaagcgtgtctacctcatttgcccacct 380
Query: 181 gattccctagtacacggactctagcaagcaaggttagtcactggaagcatcggtctactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattccctagtacacggactctagcaagcaaggttagtcactggaagcatcggtctactc 440
Query: 241 atacactgagatagcactgagggcctcgttatcagttcatccactcaccttccctcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacactgagatagcactgagggcctcgttatcagttcatccactcaccttccctcttcc 500
Query: 301 tactcttcagggtctcatggactgactatgtagggctggtttgcctggaacttgctatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactcttcagggtctcatggactgactatgtagggctggtttgcctggaacttgctatgc 560
Query: 361 acatcatcaggcggctttgaactcagagatttgcttgcat 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatcatcaggcggctttgaactcagagatttgcttgcat 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_a02.g1 MSMg01no086_a02.g1 CHROMAT_FILE:
MSMg01no086_a02.g1 PHD_FILE: MSMg01no086_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:34 2005
(455 letters)
>mm_chr10_88417651_88418506
Length = 856
Score = 862 bits (446), Expect = 0.0
Identities = 452/454 (99%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 1 agtgcttctctacagaagacatgtttaaacaaccaatacatccagatcgttctaaatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agtgcttctctacagaagacatgtttaaacaaccaatacatccagatcgttctaaatgca 595
Query: 61 tgaaaactttatgacactggggacacttttcaatagggacattagtgatggtgatagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgaaaactttatgacactggggacacttttcaatagggacattagtgatggtgatagcag 535
Query: 121 caatgagttgtacttgtgtagttcaaagtttccaggatgatgcctgcctccacataggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caatgagttgtacttgtgtagttcaaagtttccaggatgatgcctgcctccacataggtg 475
Query: 181 ttcaacaaacacatatgcagctcaatgtcaattcaaatgttagaggctgggggccaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttcaacaaacacatatgcagctcaatgtcaattcaaatgttagaggctgggggccaggta 415
Query: 241 ggaaggactcgttaatggcaggcagcagaaatcccatgtaaattgatatgcacaaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggaaggactcgttaatggcaggcagcagaaatcccatgtaaattgatatgcacaaaagag 355
Query: 301 aaatttgtagtttaaggcagttggcagcatcaagaagccacaggaagtttcttttaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaatttgtagtttaaggcagttggcagcatcaagaagccacaggaagtttcttttaaaat 295
Query: 361 gaaagtgctaagagttggatagagtcagcagaatattctctgttccagttcgg-tttttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 294 gaaagtgctaagagttggatagagtcagcagaatattctctgttccagttcggttttttt 235
Query: 420 ttccctctaatatgttgtctccctccctccctcc 453
|||||||||||||||||||||||||||| |||||
Sbjct: 234 ttccctctaatatgttgtctccctcccttcctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
