Query= MSMg01no086_g04.b1 MSMg01no086_g04.b1 CHROMAT_FILE:
MSMg01no086_g04.b1 PHD_FILE: MSMg01no086_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:07 2005
(472 letters)
>mm_chr10_7008390_7009261
Length = 872
Score = 866 bits (448), Expect = 0.0
Identities = 463/468 (98%)
Strand = Plus / Minus
Query: 5 gaattctcccatcttcccttctcagtctccatgtgccaaacagaagcccagacaactggg 64
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 617 gaattctcccagcttcccttctcagtttccatgtgccaaacagaagcccagacaactggg 558
Query: 65 ctggagacaccttatctctgctcacatccaaccagctctgtcacagattatctgcaagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctggagacaccttatctctgctcacatccaaccagctctgtcacagattatctgcaagtt 498
Query: 125 tgacctttctgtccatgcagtgacttcattcagaggctcagctccccttactgggtgtgt 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 497 tgacctttctgtccatgcagtgacttcattcagaggctcagccccccttactgggtgtgt 438
Query: 185 ggctacaaatagctttctaatctgccttcactcttgcttctaccagacctctggcaggga 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggctacaaatagctttcgaatctgccttcactcttgcttctaccagacctctggcaggga 378
Query: 245 tcctctgattatccagagaccaggaatgagagggaagtcacaggatctgttgatttctcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcctctgattatccagagaccaggaatgagagggaagtcacaggatctgttgatttctcg 318
Query: 305 gccaaggagataaagtaggtgctacctgaggctttcattctggtttcccaggctgcctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gccaaggagataaagtaggtgctacctgaggctttcattctggtttcccaggctgcctct 258
Query: 365 tgtttgctcccaaatccagccagtaagtgcagtgggtgccatgtgaattttggattctcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgtttgctcccaaatccagccagtaagtgcagtgggtgccatgtgaattttggattctcc 198
Query: 425 cttcgccttctcctctgagaagtgggaccccctttgggtctcccccta 472
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cttccccttctcctctgagaagtgggaccccctttgggtctcccccta 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_g04.g1 MSMg01no086_g04.g1 CHROMAT_FILE:
MSMg01no086_g04.g1 PHD_FILE: MSMg01no086_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:07 2005
(368 letters)
>mm_chr10_6882953_6883717
Length = 765
Score = 627 bits (324), Expect = 0.0
Identities = 357/368 (97%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 1 ctaaaaagacatcaaggaaatcagtacaaggggccacgttattaaagcctgggcttgaga 60
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ctaaaaagacatcaaggaagtcagtacaaggggccacattattaaagcctgggcttgaga 260
Query: 61 atgtgcccagagtaactgatttcagctgaaggtaatgaatgcccttgtatgtgttaaact 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 atgtgcccagagtaactgatttcagctgaagttaatgaatgcccttgtatgtgttaaact 320
Query: 121 ccagtgtaaaatgagaaagggattttaggaaaacaggaaatgcttacacttcccagccca 180
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ccaatgtaaaatgagaaagggattttaggaaaacaggaaatgcttaaacttcccagccca 380
Query: 181 agccttctccttgctctcccctctggggggatagatccaggtcactgtcacctacagata 240
|| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ag-ctt-t-cttgctcttccctctggggggatagatccaggtcactgtcacctacagata 437
Query: 241 tcctttacgtggactcaccagctatgtttgacttccatgctcagtcttacaatgtgtatg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcctttacgtggactcaccagctatgtttgacttccatgctcagtcttacaatgtgtata 497
Query: 301 cacaacatatggacatcttgtcgatcctacaaagggccagtctagagtctaagattctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cacaacatatggacatcttgtcgatcctacaaagggccagtctagagtctaagattctat 557
Query: 361 cagattca 368
| ||||||
Sbjct: 558 ccgattca 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 765
Length adjustment: 9
Effective length of query: 359
Effective length of database: 756
Effective search space: 271404
Effective search space used: 271404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
