Query= MSMg01no086_n02.b1 MSMg01no086_n02.b1 CHROMAT_FILE:
MSMg01no086_n02.b1 PHD_FILE: MSMg01no086_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:42 2005
(466 letters)
>mm_chr10_63310081_63310946
Length = 866
Score = 893 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Plus
Query: 1 aatgaatttaaaggcaagagtagcattagcaaacaggacacagaggtaggcccatccccg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aatgaatttaaaggcaagagtagcattagcaaacaggacacagaggtaggcctatccccg 260
Query: 61 aggataggagtccagtggtaacgtctttgcctgctgtgtgtaaggtccaataaatcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggataggagtccagtggtaacgtctttgcctgctgtgtgtaaggtccaataaatcccag 320
Query: 121 caacaaaagctaaaagtaaaagccatggattatgcctggaatattagcacggagcaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacaaaagctaaaagtaaaagccatggattatgcctggaatattagcacggagcaggct 380
Query: 181 gaggcacaaaaatctcaagttcaaggccagcttgggctatttggtaagtttgacactaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggcacaaaaatctcaagttcaaggccagcttgggctatttggtaagtttgacactaga 440
Query: 241 tcaggctacagagtgagtttgaggacagcatgaacaatagaatgagaccttgactcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggctacagagtgagtttgaggacagcatgaacaatagaatgagaccttgactcaaaa 500
Query: 301 cggagcaaccaagcatacatataatgtcagcagaagtcatattaattgaaaacctatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggagcaaccaagcatacatataatgtcagcagaagtcatattaattgaaaacctatgtg 560
Query: 361 acaattgtagatcttatttgtcttatttataagagttgaaacaaaggcctccaccatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaattgtagatcttatttgtcttatttataagagttgaaacaaaggcctccaccatttg 620
Query: 421 aactcccttcccagtataaagggggagggaatggttcactttaatt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactcccttcccagtataaagggggagggaatggttcactttaatt 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_n02.g1 MSMg01no086_n02.g1 CHROMAT_FILE:
MSMg01no086_n02.g1 PHD_FILE: MSMg01no086_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:42 2005
(456 letters)
>mm_chr10_63387662_63388517
Length = 856
Score = 772 bits (399), Expect = 0.0
Identities = 444/461 (96%), Gaps = 5/461 (1%)
Strand = Plus / Minus
Query: 1 agataaactgaggttaacagtagaagtttccaactgcatccattaccatatgagctcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 500 agataaactgaggttaacagtagaagtttccaactgcatccattaccatatgaactcaac 441
Query: 61 acagttatacctaagttgagatgccaagctcagacgatccaggattgatgttttaaaggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 440 acagttatacctaagttgagatgccaagctcagacgatccaggattgatgttttaaagac 381
Query: 121 tgtgacttcatcatgagggtgaggtaggctggcaatcagcactgtattgaaaatacagtg 180
|||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 tgtgacatcatcatgaaggtgaggtaggctggcgatcagcactgtattgaaaatacagtg 321
Query: 181 tggggggaggggggacgtttggagaatttagtggcaaatgagcaccgggaggctgatagt 240
||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 320 tggggggagggggaacgtttggagaatttagtggcaaataagcactgggaggctgatagt 261
Query: 241 ttattttttaatagtgttctgtggcctgcataggattttattgtgtggttaaaaagcagc 300
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 ttattttttaatggtgttctgtggcctgcataagattttattgtgtggttaaaaagcagc 201
Query: 301 tatatttaatttttttaaa----ttagagt-aaattcacattttaaaagttggttgccat 355
||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 200 tatatttaattttttaaaaaaaattagagttaaattcacattttaaaagttggttgccat 141
Query: 356 tataaggatattgaatgcaccagctatccaggacttactgaattcttgaattccttccta 415
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tataaggatattgagtgcaccagctatccaggacttactgaattcttgaattccttccta 81
Query: 416 ctccctaaaatttatagatttctttccatatatttgtcttc 456
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ctccctaaaatttatagatttctttccatatatttgtcttc 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
