CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGGTGTACCTTTTGGGGTCACTTAAGTATACTATCATATCATCTG
CAAATAGTGATATTTTGACTTCCTTTCCAATTTGTATCCCTTTGACCTCC
TTTTGTTATCTAATTGCTCTGGTTAGGACTTCAGGTACTATATTGAATTG
GTAGGGAGAGAGTGGGCAGCCTTGTCTAGTCCTTGATTTTAGTGGGATTG
CTTCAAGTTTCTCTCCATTTACTTTGATATTGGCTACTGGTTTGCTGTAT
ATCGCTTTTACTATGTTTAGGTATGGGCCTTGAATTCCTGATTTTTCCAA
GACTTTTACCATGAAGGGGTGTTGAATTTTGTCAAATGCTTTCTTAGCAT
CTAATGAGATGATCTTGAGCTTCTTGAAGTTCAAGAAGAAGGAAGACCAA
CGTGTCTTCAGTCCTTAGAAGGGGGAACAAAATACTCAGATAGGAAATAT
GGAGACAGTGTAGAGCAGAAACAGAAGGAAAGGCCATCCAGAGTCTGCCC
CACCTGGGGACCCATCTCATATATACTCACCAAACTCAGACACTGGGTTG
GTGCACAGAAGTGTTTGCTGTCAGGAGTCTGTACGAAACGGAAGGAATAC
ATGATGTTATCTATATAATAATTCCCCTAATAGATTAATTGGTATATATT
TTATGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCATCAGAAACTTCTATTTCCTAGGATTTATAGCTAAGTCCTTAAA
AAATTGCTCTTTGATGAAACTTGAAAAAATTTCCTCAGTTTTCAAGTACA
TAATAAAAAATGCCTTATAGCTTAACAATGTTTTGATATTTCCCATTTAA
GAAATAAAAATCTTGAAGCTATGAGGTTTGAATCCTGACACAGGATATTA
CTGAGGTTAATGGCGATATAGAGTAACTAAATATATTTTTAAAAAATCAC
ATAAAACAACCTATCTATAAATTTAATATAAACTATTTTCTTATCAGCCT
CCTTTTGCTTTTATAACTTTACATATCTATTAGTAGTCTGTTTCTCTCTT
CCCCACCCTCCTTCTGAGTCATGGTCTTACACTGCCCAGTCAGGTATTAA
ATTTGGCAATAAACCAGGATGGTTTGAACTCTTGACTTTAATCCTCTTCT
GTTCGTAAGTGCTGGGATTTGAGGTATGTGACATCACACAAAGCTGAAGT
GTCTTTATCAATTGAATTTCAATAGACTATAAGAAATTAGCAAACTAAAA
ACAAAAAAATTATATACAAAGAGGAAGAAGCTAAATATCAGTTAAATATT
TAGAATCTTTTATAATTTCAGAGTATTTTTGTTCTAAG

Query= MSMg01no086_o05.g1 MSMg01no086_o05.g1 CHROMAT_FILE:
MSMg01no086_o05.g1 PHD_FILE: MSMg01no086_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:48 2005
         (628 letters)



>mm_chr10_50519908_50520935
          Length = 1028

 Score = 1060 bits (548), Expect = 0.0
 Identities = 554/556 (99%), Gaps = 1/556 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcagaaacttctatttcctaggatttatagctaagtccttaaaaaattgctctttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 catcagaaacttctatttcctaggatttatagctaagtccttaaaaaattgctctttgat 497

                                                                       
Query: 61  gaaacttgaaaaaatttcctcagttttcaagtacataataaaaaatgccttatagcttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaaacttgaaaaaatttcctcagttttcaagtacataataaaaaatgccttatagcttaa 437

                                                                       
Query: 121 caatgttttgatatttcccatttaagaaataaaaatcttgaagctatgaggtttgaatcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 caatgttttgatatttcccatttaagaaataaaaatcttgaagctatgaggtttgaatcc 377

                                                                       
Query: 181 tgacacaggatattactgaggttaatggcgatatagagtaactaaatatatttttaaaaa 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgacacaggatactactgaggttaatggcgatatagagtaactaaatatatttttaaaaa 317

                                                                       
Query: 241 atcacataaaacaacctatctataaatttaatataaactattttcttatcagcctccttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atcacataaaacaacctatctataaatttaatataaactattttcttatcagcctccttt 257

                                                                       
Query: 301 tgcttttataactttacatatctattagtagtctgtttctctcttccccaccctccttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgcttttataactttacatatctattagtagtctgtttctctcttccccaccctccttct 197

                                                                       
Query: 361 gagtcatggtcttacactgcccagtcaggtattaaatttggcaataaaccaggatggttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gagtcatggtcttacactgcccagtcaggtattaaatttggcaataaaccaggatggttt 137

                                                                       
Query: 421 gaactcttgactttaatcct-cttctgttcgtaagtgctgggatttgaggtatgtgacat 479
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gaactcttgactttaatcctgcttctgttcgtaagtgctgggatttgaggtatgtgacat 77

                                                                       
Query: 480 cacacaaagctgaagtgtctttatcaattgaatttcaatagactataagaaattagcaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  cacacaaagctgaagtgtctttatcaattgaatttcaatagactataagaaattagcaaa 17

                           
Query: 540 ctaaaaacaaaaaaat 555
           ||||||||||||||||
Sbjct: 16  ctaaaaacaaaaaaat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)