Query= MSMg01no087_f15.b1 MSMg01no087_f15.b1 CHROMAT_FILE:
MSMg01no087_f15.b1 PHD_FILE: MSMg01no087_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:26 2005
(241 letters)
>mm_chr10_63826642_63827282
Length = 641
Score = 400 bits (207), Expect = e-116
Identities = 231/243 (95%), Gaps = 8/243 (3%)
Strand = Plus / Plus
Query: 1 gaagaacttctatataaagacattgttcaggaaccctcttgtgtacccacattgctcatg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 gaagaacttctatataaagacattgttcaggaaccctcttgtgtaaagacattgctcatg 260
Query: 61 aattgttttgtataaagtcattgttcaggtattgttttgcatgaaaacattgttcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgttttgtataaagtcattgttcaggtattgttttgcatgaaaacattgttcaggaa 320
Query: 121 ttgttttatataaagacattgttcacgaatctctatcaccaccatcccttcatagtattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttttatataaagacattgttcacgaatctctatcaccaccatcccttcatagta--- 377
Query: 181 t----atcgtccataattttagagcatctcgcctttaaattgtcttagcctgtgatgata 236
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 378 -gggcatcgtccataattttagagcatctcacctttaaattgtcttagcctgtgatgata 436
Query: 237 tag 239
|||
Sbjct: 437 tag 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_f15.g1 MSMg01no087_f15.g1 CHROMAT_FILE:
MSMg01no087_f15.g1 PHD_FILE: MSMg01no087_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:26 2005
(282 letters)
>mm_chr10_63900781_63901462
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 actggtgttctggatgactgtttttcagtgttaggtctagcatagcacatctaccaaaat 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 482 actggtgttctggatgactgtttttcagtgttaggtctagcatagtagatctaccaaaat 423
Query: 61 gacatcacaggggaaaattctagtaacttgcaatatttttgaataacccaatgtcaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gacatcacaggggaaaattctagtaacttgcaatatttttgaataacccaatgtcaaaaa 363
Query: 121 agcacagttctaacatcatgtaaatgttgtgactgaatactagagatgttcatggcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agcacagttctaacatcatgtaaatgttgtgactgaatactagagatgttcatggcccat 303
Query: 181 aacttcaggtgaagcatctgtcttccacctttaatgagaaaagaagcagcattttatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aacttcaggtgaagcatctgtcttccacctttaatgagaaaagaagcagcattttatgtt 243
Query: 241 taaaattaatagcttggacacgccagaattacagggaaaata 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taaaattaatagcttggacacgccagaattacagggaaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
