Query= MSMg01no087_g18.b1 MSMg01no087_g18.b1 CHROMAT_FILE:
MSMg01no087_g18.b1 PHD_FILE: MSMg01no087_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:32 2005
(157 letters)
>mm_chr10_11683587_11684143
Length = 557
Score = 259 bits (134), Expect = 5e-74
Identities = 149/154 (96%)
Strand = Plus / Minus
Query: 1 cttgtatgtctcaatatgatattctttagggatctctgtttgcagcttatgtcttggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cttgtatgtctcaatatgatattctttagggatctctgtttgcagcttatgtcttggaaa 295
Query: 61 tgcaaacacagcaacatgcggccactgtatatgtgcagcaatgccacagttagagttaga 120
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgcaaaaacagaaacatgcggccactgtatatgtgcagcaatgccacagttagagttaga 235
Query: 121 ctgcgactaaggaactcttcttgcaaaagtgata 154
||| || |||||||||||||||||| ||||||||
Sbjct: 234 ctgtgagtaaggaactcttcttgcagaagtgata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 557
Length adjustment: 8
Effective length of query: 149
Effective length of database: 549
Effective search space: 81801
Effective search space used: 81801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_g18.g1 MSMg01no087_g18.g1 CHROMAT_FILE:
MSMg01no087_g18.g1 PHD_FILE: MSMg01no087_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:32 2005
(427 letters)
>mm_chr10_11593930_11594759
Length = 830
Score = 717 bits (371), Expect = 0.0
Identities = 414/430 (96%), Gaps = 3/430 (0%)
Strand = Plus / Plus
Query: 1 ttttcagcgaggaagaagaangaaattatgctgtttctgaggaaatgagtggaagcagag 60
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcagtgaggaagaagaatgaaattatgctgtttctgaggaaatgagtggaagcagag 260
Query: 61 gctatcatggtaagccaaagaaggcagctgcagaagcttttctctcatctgtggaaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctatcatggtaagccaaagaaggcagctgcagaagcttttctctcatctgtggaaacaa 320
Query: 121 acgagcaatcaagtaaaacggaataactaacctggacatggacaacagaacatgga---a 177
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgagcaatcaagcaaaacggaataactaacctggacatggacaacagaacatggagggg 380
Query: 178 gaggagggaagggggcgagggaatagtaaacatggcacaatcattgaaagcttagtacat 237
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 gaggaggggagggggcgagggaatagtaaacatggcacaatcattgaaagcctagtacat 440
Query: 238 gcattatgagagtgtcagggattcctattaatttatgaacataatatacattcataattc 297
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcattatgagaatgtcagggattcctattaatttatgaacataatatacattcataattc 500
Query: 298 taatgaccagttagagggtgagaggatgtaaggctctattcattgctccaacacatgttg 357
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 taatgaccagttagaggatgagaggatgtaaggctctattcattgttccaacacatgttg 560
Query: 358 ttatgcatttttttccctttgaagcacgaagaaaaaagatactgactgatgaacaatcta 417
||||| |||||||||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct: 561 ttatgtatttttttccctttgaagtaggaagaaaaaagatactgactgatgaaaaatcta 620
Query: 418 cctgagatta 427
||||||||||
Sbjct: 621 cctgagatta 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 830
Length adjustment: 9
Effective length of query: 418
Effective length of database: 821
Effective search space: 343178
Effective search space used: 343178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
