CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTAAGCCTCAGTTTAATATCACAGGTAATATAGTGTCCCTACAATAT
ATTTATATTGGTTCCTGTGGTAGGACACTTCATTATGGCTTCTTCTTAAT
CTGTCCCTTTGACACTCTCGTGTCCTCCTTGCCTCTTCAGTTCTCCTAGT
ATTATGTTGTAGAATGCAGAGGGAGACTTTCTTCTGTTTTTCATTACATC
TTTTCAGATTTATTCTTTCACTTTTTATTCTATTTTCTTTTTTAATTCTC
TCATGCATTACATCTCTACCCCAGTTTTCCCCCACCTCCATTCCTTTCAG
TACCTCTGTTCATATGAAAGTTGTATCTTTAGTTTTTCTTTCTTTCTTTC
TTTTTTGGTAATGCTTTAAAAGAAAGATGTCGATATTGGAGGGACTCTAT
CCAGTAAAACAACCTAGGAGAAATGTGGGGTCTATTTCACAGAACATTCA
TTTTTCATATTATCCCCCCATAATTAAACCAAATAAATCACACAGTTTTA
CAAATATTAATGTAATTGCATGAATCAGTCAGATATGTTTTCTCAAGATA
AACCTATACTGGGTCCAAATAATTTTAGCAAAAGATTATCATTTACNAAG
CACAGCCTCCTTTTATAACAAGGTTCTTCTATATAGAAACAGTATTGCCA
ATGACCT

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTACCAGAGAAATTCAGAAGAGTAATCCCATATTTTGTAGTCA
GAAATGTTTCTAACTGACCCGAATTAAACATCTAAACAATGCTAGCTGAA
ATACTGCTTTTAATTCTATGCATACCATGGGGTATGAAGGTCATGAAGTA
TGGGTGCGAGCACCCTAAACTAGCAGCACGATGATGGTTAATTTTTACAG
AGTTACATGTTCTAGACTCACTTAGGAGGCAAACATTTGGGCATGCCTGT
GAGTGCAGTTCTAGTATTTTTTTAGTAAGTGTGAGAAAACTCATCCTAGC
TAAGAATAATACCTTTGCATATGTCAGGGAACTGAGCAAATAGAAAGATA
TATGTTAGAAAAGCACCCCTGTTTTGGTTCTGATTCCTGTGTGTGCAAGG
TAACCAGCTACCTTAGGTGTTTATTGCCATGAGTTCCTCACCATGATGAA
AATACATGTGCCCATGAACTCTCACCCAACTAGCTATTCTATCTCCAAGT
TGTGTTTTCCAGGTATCTTTTGAGGTAATGAGAAGAATAAATAACACACA
CACACGCACACACATACACACACACATACACACCACTCGAAGGTTCGGGG
TAATTATAGTTTTAATGCTCATACACCCCTTCTTTTTTTTTTTCCCACTT
CCTTCCCTTCTCTTTCA

Query= MSMg01no088_j05.b1 MSMg01no088_j05.b1 CHROMAT_FILE:
MSMg01no088_j05.b1 PHD_FILE: MSMg01no088_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:06 2005
         (660 letters)



>mm_chr10_97129307_97130370
          Length = 1064

 Score = 1216 bits (629), Expect = 0.0
 Identities = 651/660 (98%), Gaps = 4/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttaagcctcagtttaatatcacaggtaatatagtgtccctacaa-tatattta 63
           ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattctttaagcctcagttttatatcacaggtaatatagtgtccctacaaatatattta 264

                                                                       
Query: 64  tattggttcctgtggtaggacacttcattatggcttcttcttaatctgtccctttgacac 123
           ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattggttcctttggtaggacacgtcattatggcttcttcttaatctgtccctttgacac 324

                                                                       
Query: 124 tctcgtgtcctccttgcctcttcagttctcctagtattat---gttgtagaatgcagagg 180
           ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 325 tctcgtgtcctccttgcctcttcagttctcctagtattattatgttgtagaatgcagagg 384

                                                                       
Query: 181 gagactttcttctgtttttcattacatcttttcagatttattctttcactttttattcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagactttcttctgtttttcattacatcttttcagatttattctttcactttttattcta 444

                                                                       
Query: 241 ttttcttttttaattctctcatgcattacatctctaccccagttttcccccacctccatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttcttttttaattctctcatgcattacatctctaccccagttttcccccacctccatt 504

                                                                       
Query: 301 cctttcagtacctctgttcatatgaaagttgtatctttagtttttctttctttctttctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctttcagtacctctgttcatatgaaagttgtatctttagtttttctttctttctttctt 564

                                                                       
Query: 361 ttttggtaatgctttaaaagaaagatgtcgatattggagggactctatccagtaaaacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttggtaatgctttaaaagaaagatgtcgatattggagggactctatccagtaaaacaa 624

                                                                       
Query: 421 cctaggagaaatgtggggtctatttcacagaacattcatttttcatattatccccccata 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctaggagaaatgtggtgtctatttcacagaacattcatttttcatattatccccccata 684

                                                                       
Query: 481 attaaaccaaataaatcacacagttttacaaatattaatgtaattgcatgaatcagtcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 attaaaccaaataaatcacacagttttacaaatattaatgtaattgcatgaatcagtcag 744

                                                                       
Query: 541 atatgttttctcaagataaacctatactgggtccaaataattttagcaaaagattatcat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atatgttttctcaagataaacctatactgggtccaaataattttagcaaaagattatcat 804

                                                                       
Query: 601 ttacnaagcacagcctccttttataacaaggttcttctatatagaaacagtattgccaat 660
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttacaaagcacagcctccttttataacaaggttcttctatatagaaacagtattgccaat 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1064
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1054
Effective search space:   685100
Effective search space used:   685100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)