Query= MSMg01no089_c18.b1 MSMg01no089_c18.b1 CHROMAT_FILE:
MSMg01no089_c18.b1 PHD_FILE: MSMg01no089_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:53 2005
(293 letters)
>mm_chr10_38274191_38274886
Length = 696
Score = 468 bits (242), Expect = e-136
Identities = 281/296 (94%), Gaps = 5/296 (1%)
Strand = Plus / Plus
Query: 2 aatttttaaatggggagaaggataaaatatcatcccaacaacattaattttggtttagtt 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 aatttttaaatggggagaaggataaaatatcatcacaacaacattaattttggtttagtt 261
Query: 62 tcatcagtgaattgcatcattaaatataggaatcaagaattaaaccataaacaagacttt 121
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 262 tcatcagtgaattgcgtcattaaatataggaatcaagaattaaaccataagcaagacttt 321
Query: 122 taaattctacagaaaatgtgcagcctaaaacatacctgtaagattaagcaatgtgaagcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taaattctacagaaaatgtgcagcctaaaacatacctgtaagattaagcaatgtgaagcc 381
Query: 182 aacatattatttgtgtatctgaagactaat----gtctgccataacgtaagatccacaga 237
|||||||||||||| |||||||| |||||| ||||| ||||||||||||| ||||||
Sbjct: 382 aacatattatttgtatatctgaatactaattaatgtctggcataacgtaagatacacaga 441
Query: 238 tgtactgtaacaaacatgcttctagagctaattaaaggaaagtttcttgtttttaa 293
|| |||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 442 tg-actgtaacaaacatgcaactaaagctaattaaaggaaagtttcttgtttttaa 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 696
Length adjustment: 9
Effective length of query: 284
Effective length of database: 687
Effective search space: 195108
Effective search space used: 195108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_c18.g1 MSMg01no089_c18.g1 CHROMAT_FILE:
MSMg01no089_c18.g1 PHD_FILE: MSMg01no089_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:53 2005
(289 letters)
>mm_chr10_38464736_38465424
Length = 689
Score = 472 bits (244), Expect = e-137
Identities = 277/288 (96%)
Strand = Plus / Minus
Query: 1 aggttccttgtttttgttatcaatgattaaattgttctggcctggacacttttgggtaca 60
|||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 488 aggtaccttgtttttcttatcaatgattaaattgttcttgcctggacacttttgggtata 429
Query: 61 ggatagcttcagctgcctttatctgaaggcaacattattgtcaaagtaccttacagagct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 428 ggatagcttcagctgcctttatctgaaggcaacattattgtcaaagtaccttactgagct 369
Query: 121 tttgactattgaattgtctaatacacataggtatgcctcaagaggctgtggtatttactg 180
|||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 368 tttggctattgaattgtctgatacacataggtatgtctcaagaggctatggtatttactg 309
Query: 181 atgtgcgtactagttttaataaatataacccttgggtgttataatccagttccaacttgc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atgtgcttactagttttaataaatataacccttgggtgttataatccagttccaacttgc 249
Query: 241 ttcctgtttgcacttgactctcttcatctgagagcttgtttcttcctc 288
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 248 ttcctgtttgcacttgactttcttcatctgagagcttgtttcttcctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
