Query= MSMg01no090_i02.b1 MSMg01no090_i02.b1 CHROMAT_FILE:
MSMg01no090_i02.b1 PHD_FILE: MSMg01no090_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:41 2005
(369 letters)
>mm_chr10_125255722_125256490
Length = 769
Score = 613 bits (317), Expect = e-180
Identities = 354/369 (95%), Gaps = 5/369 (1%)
Strand = Plus / Minus
Query: 1 tacacagagaaaccctgtctcgaaaaaaccaaaaccaaccaaccaaaaaaacagaaacaa 60
|||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 644 tacacagagaaaccctgtctcgaaaaaaccaaaaccaaacaaacaaaaa-----aaacaa 590
Query: 61 aaacaacaacaacaacaaaagagttggcatgatcattaagacatcttttattcaaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaacaacaacaacaacaaaagagttggcatgatcattaagacatcttttattcaaaaagt 530
Query: 121 attttcccctagagataatttatgacaatgggtaaaaaatgggaggcaagtgtttcctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 attttcccctagagataatttatgacaatgggtaaaaaatgggaggcaagtgtttcctga 470
Query: 181 agtgaggaccacaaccctgagctgacagctacgtcatttccctgtgtgtgtctgcctcct 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 469 tttgaggaccacaaccctgagctgacagctatgtcatttccctgtgtgtgtctgcctcct 410
Query: 241 ttcccagtgtacacacatctacttctctgttttattactaattaggaaatgtcagtaagc 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 409 ttcccagtgtacacacatctacttctctgttttattactagttaggaaatgtcagtaagc 350
Query: 301 atgtgtttggcaaggataagcaatatccttccctgtgtaattcaactctaaataatattc 360
|||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 349 atgtgtttggcaaggataagcaatattcttccctgtgtaatttaactctaaacaatattc 290
Query: 361 ttattaggt 369
||||||||
Sbjct: 289 atattaggt 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_i02.g1 MSMg01no090_i02.g1 CHROMAT_FILE:
MSMg01no090_i02.g1 PHD_FILE: MSMg01no090_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:41 2005
(287 letters)
>mm_chr10_125089557_125090244
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 catattattggctgaaaa-atgtcccagtgaggaacggatccctcctacaagataatttt 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catattattggctgaaaacatgtcccagtgaggaacggatccctcctacaagataatttt 260
Query: 60 gttctcacaactaatgacaagagtcaaggcaccaagaaaagtttcaataaatgttaaagg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctcacaactaatgacaagagtcaaggcaccaagaaaagtttcaataaatgttaaagg 320
Query: 120 gtagaaatataaagtggtgaccctaaaatgggagattactttataatgaagtgctaagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagaaatataaagtggtgaccctaaaatgggagattactttataatgaagtgctaagat 380
Query: 180 gtattatttttagaaatcctttgacagaagcaaggacacatgttgggagtgactgataca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattatttttagaaatcctttgacagaagcaaggacacatgttgggagtgactgataca 440
Query: 240 ttatatattctgaactctcttgtttgtgtcctgactaaaaagtggctg 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatatattctgaactctcttgtttgtgtcctgactaaaaagtggctg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
