Query= MSMg01no090_p11.b1 MSMg01no090_p11.b1 CHROMAT_FILE:
MSMg01no090_p11.b1 PHD_FILE: MSMg01no090_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:18 2005
(273 letters)
>mm_chr10_61559219_61559890
Length = 672
Score = 507 bits (262), Expect = e-148
Identities = 268/270 (99%), Gaps = 1/270 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggcatgtatccaccatgcaggatttatacagagctccagtcccagcccagg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ggaattccaggcatg-agccaccatgcaggatttatacagagctccagtcccagcccagg 299
Query: 64 agttcctgcatgccaggcaagtgcttctcctgcgtcctcctgggggcttggtgtctctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agttcctgcatgccaggcaagtgcttctcctgcgtcctcctgggggcttggtgtctctca 239
Query: 124 tgatgccactgccctgagagagagacacaaactgagggctggggagatggctctgtgggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tgatgccactgccctgagagagagacacaaactgagggctggggagatggctctgtgggt 179
Query: 184 aaaagctcttgccacctaagtgtaaggacctgtcctagttctggggagaacccacctaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aaaagctcttgccacctaagtgtaaggacctgtcctagttctggggagaacccacctaac 119
Query: 244 agctaggttcatagcacacgcacctgcgat 273
||||||||||||||||||||||||||||||
Sbjct: 118 agctaggttcatagcacacgcacctgcgat 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 672
Length adjustment: 9
Effective length of query: 264
Effective length of database: 663
Effective search space: 175032
Effective search space used: 175032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_p11.g1 MSMg01no090_p11.g1 CHROMAT_FILE:
MSMg01no090_p11.g1 PHD_FILE: MSMg01no090_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:18 2005
(235 letters)
>mm_chr10_61364951_61365585
Length = 635
Score = 385 bits (199), Expect = e-111
Identities = 226/235 (96%)
Strand = Plus / Plus
Query: 1 cagttccctcactgacactggtttcattgaaggtgtgtgagcaggtacctcggtacccaa 60
|||||||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 201 cagttccctcgctgacaccggtttcattgaaggtgtgtaagcaggtaccttggtacccca 260
Query: 61 ctcatcctccttcgtacagctgtgctatcttgctggatccatcacccacatcccacatcc 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcatcctccttcatacagctgtgctatcttgctggatccatcacccacatcccacatca 320
Query: 121 cccacatcccacatcccccacatcccaggcaatccctaaggaagcatgccagagggaagt 180
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 cccacatcccacatcacccacatcccaggcagtccctaaggaagcatgccagagggaagt 380
Query: 181 caggaggctctaggtaactcaaaggacctggtactgacagtaaggatagggtttg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaggctctaggtaactcaaaggacctggtactgacagtaaggatagggtttg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
