Query= MSMg01no091_b19.b1 MSMg01no091_b19.b1 CHROMAT_FILE:
MSMg01no091_b19.b1 PHD_FILE: MSMg01no091_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:30 2005
(476 letters)
>mm_chr10_89220402_89221277
Length = 876
Score = 712 bits (368), Expect = 0.0
Identities = 434/478 (90%), Gaps = 37/478 (7%)
Strand = Plus / Plus
Query: 1 agctcataggttgatgaaagtcaacttcttgggttggcaatggggctgagaccccatcag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 201 agctcataggttgatgaaagtcaacttcttgggttggcaatggggccgagagtccatcag 260
Query: 61 cttgcatgtctttatttgattctcctcccacttacattgagccacagtcaatctttctcc 120
|||||||||||||||||||||||||||||| |||
Sbjct: 261 cttgcatgtctttatttgattctcctccca---------------------tct------ 293
Query: 121 tcccacctacattgagccacagtcaatctactgagaccatgagaaactgattcatgggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 --------acattgagccacagtcaatctactgagaccatgagaaactgattcatgggaa 345
Query: 181 gaaaggatagtcttgtaaaataaaagtccttactgcttgtttttgtttctcaaggtatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaaaggatagtcttgtaaaataaaagtccttactgcttgtttttgtttctcaaggtatac 405
Query: 241 catttttttt-ctaatgaaaatgtcttatactatggtatactgttctatattacactaca 299
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cttttttttttctaatgaaaatgtcttatactatggtatactgttctatattacactaca 465
Query: 300 tctgcatatggccattgtatgtgaccctttataaaccttgaccttattacttactgcctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tctgcatatggccattgtatgtgaccctttataaaccttgaccttattacttactgcctc 525
Query: 360 tgtcctctgtctcattttccgagtaccaagcttctcttaaataagcatgtctcagggaat 419
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 526 tgtcctctgtctcattttccgagtacaaagtttctcttaaataagcatgtctcagggaat 585
Query: 420 gctttcccaaagttgtcttttttttttctt-cttgttttttcgagacagggtttctct 476
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 586 gctttcccaaagttgtcttttttttttttttcttgttttttcgagacagggtttctct 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_b19.g1 MSMg01no091_b19.g1 CHROMAT_FILE:
MSMg01no091_b19.g1 PHD_FILE: MSMg01no091_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:30 2005
(235 letters)
>mm_chr10_89365251_89365885
Length = 635
Score = 420 bits (217), Expect = e-122
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 2 aaaggagctcttatagccaatagggggagctctctgaatccccacagataagctgtcccc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaaggagctcttatagccaatagggggagctctctgaatccccacagataagctgtcccc 371
Query: 62 ctctgtaagctgtgaccatctacccaggggaaaggtccttatactcttctaagccagata 121
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 370 ttctgtaagctgtgaccatctacccaggggaaaggtccttaaactcttctaagccagata 311
Query: 122 atctgactatgtggctatctaggctcactacttgagccacatgaattaaattgagaaacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atctgactatgtggctatctaggctcactacttgagccacatgaattaaattgagaaacc 251
Query: 182 caaagacaaagcagatcgctgtctcagaaccttcctcctccttactcac 230
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 caaagccaaagcagatcgctgtctcagaaccttcctcctccttactcac 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
