Query= MSMg01no091_i16.b1 MSMg01no091_i16.b1 CHROMAT_FILE:
MSMg01no091_i16.b1 PHD_FILE: MSMg01no091_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:05 2005
(333 letters)
>mm_chr10_15520859_15521589
Length = 731
Score = 557 bits (288), Expect = e-163
Identities = 322/334 (96%), Gaps = 4/334 (1%)
Strand = Plus / Minus
Query: 1 catctgagtttggtgaggcccagttacactttgtgtactctgccctgcagtgtagctctt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 531 catctgagtttggtgaggcccagttacactttgtgtactctgcccttcagtgtagctctt 472
Query: 61 caaagatcccttatagaa-tcctgagctgctcatgaagactttatctccttgctacatgt 119
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 471 caaagatcccttatagaattcc-gagctgctcatgaagactttatctccttgctccatgt 413
Query: 120 actatattgctgttgtgttcttcttgggatatcccggagtctcctgaaactgagaaaata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 actatattgctgttgtgttcttcttgggatatcccggagtctcctgaaactgagaaaata 353
Query: 180 cattcttccttcagttacttactgcctaggttcttagtatccttaatattgtgatccaag 239
|||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 352 cattcttccttcagcaacttactgcctaggta--tagtatccttaattttgtgatccaag 295
Query: 240 tattcacacagcgtctcaaataaaattggaaaaaaattgatagaatttttgcacattttt 299
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tattcacacagtgtctcaaagaaaattggaaaaaaattgatagaatttttgcacattttt 235
Query: 300 tctcagtaggacattggcttcctccaatttctgg 333
||||||||||||||||||||||||||||||||||
Sbjct: 234 tctcagtaggacattggcttcctccaatttctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 731
Length adjustment: 9
Effective length of query: 324
Effective length of database: 722
Effective search space: 233928
Effective search space used: 233928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_i16.g1 MSMg01no091_i16.g1 CHROMAT_FILE:
MSMg01no091_i16.g1 PHD_FILE: MSMg01no091_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:05 2005
(186 letters)
>mm_chr10_15373132_15373717
Length = 586
Score = 352 bits (182), Expect = e-102
Identities = 185/186 (99%)
Strand = Plus / Plus
Query: 1 atttctagctacaccctccacagttaatagtcacaattgttatgattgcaaggtaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctagctacaccctccacagttaatagtcacaattgttatgattgcaaggtaaaggt 260
Query: 61 tacagaaaatatttggattatcagatcccctgtgtgctgctatagccaaaattatggtca 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tacagaaaatatttggattatcagatcccctgtgtgctgctatagtcaaaattatggtca 320
Query: 121 tgtcagaattctcactgaaaatccttgatgcactgaatagtactgagggcacaaaaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtcagaattctcactgaaaatccttgatgcactgaatagtactgagggcacaaaaccca 380
Query: 181 atagga 186
||||||
Sbjct: 381 atagga 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 586
Length adjustment: 8
Effective length of query: 178
Effective length of database: 578
Effective search space: 102884
Effective search space used: 102884
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
