Query= MSMg01no091_m07.b1 MSMg01no091_m07.b1 CHROMAT_FILE:
MSMg01no091_m07.b1 PHD_FILE: MSMg01no091_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:23 2005
(429 letters)
>mm_chr10_52019457_52020283
Length = 827
Score = 768 bits (397), Expect = 0.0
Identities = 421/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 1 ccaactttgaaactgaaactctcttgtcaactggacagtgatgagagtgcttttcatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ccaactttgaaactgaaactctcttgtcaactggacagtgatgagagtgattttcatatt 260
Query: 61 tcctaaatatatgcaaatagtatatagacataaatatacatttaaaaattaaagaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctaaatatatgcaaatagtatatagacataaatatacatttaaaaattaaagaataaa 320
Query: 121 aatgtgtatgtattccccttgctccttcaagaattataatgctgttgtttcagctgagct 180
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 321 aatgtgtatgtattcccctagctccttcaggaattataatgctgttgtttcagctgagtt 380
Query: 181 aattaatgaatattgtctaaggcaaatcactaatcaacatacactgataatatagtttgc 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aattaatgaatattgtctaaggcaaatcactaatcaacatacactggtaatatagtttgc 440
Query: 241 ccatatatgcatttgacttagactgtgccacatctgcactgcagactaccaaggaaatca 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccata-atgcatttgacttagactgtgccacatctgcactgcagactaccaaggaaatca 499
Query: 301 aaccattagttgttcaaaggggaggttgttgttgttgttgttttaatcagatttaatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaccattagttgttcaaaggggaggttgttgttgttgttgttttaatcagatttaatgaa 559
Query: 361 gttgaatttttaaacttgataccaggtgagaaaaacacacctcataagcatgaattatgt 420
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 560 gttgaatttttaaacttgataccaggggagaaaaacacac-tcataagcatgaattatgt 618
Query: 421 ttcaattgt 429
|||||||||
Sbjct: 619 ttcaattgt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 827
Length adjustment: 9
Effective length of query: 420
Effective length of database: 818
Effective search space: 343560
Effective search space used: 343560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_m07.g1 MSMg01no091_m07.g1 CHROMAT_FILE:
MSMg01no091_m07.g1 PHD_FILE: MSMg01no091_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:23 2005
(234 letters)
>mm_chr10_52117590_52118223
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Minus
Query: 1 tttgctgagctgacagtgggaaaactgaatctgccagaatggatttcccctgtccatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tttgctgagctgacagtgggaaaactgaatctgccagaatggatttcccctgtccatgac 375
Query: 61 ctcagcaaggatgtgctcacaaaggtggaaagagacgcatttggcctagaattaacatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctcagcaaggatgtgctcacaaaggtggaaagagacgcatttggcctagaattaacatag 315
Query: 121 gcatggtgggcagctcattcaggtttcttaataagacaaagcaagtgatgtggtgtgcag 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 314 gcatggtgggcagctcattcaggtttcttaataagacaaagcaagtgacgtggtgtgcag 255
Query: 181 caggtttgctcccactcctgaaggttttgcttcttgtttctgtctggggcaggc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 caggtttgctcccactcctgaaggttttgcttcttgtttctgtctggggcaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
