Query= MSMg01no092_h06.b1 MSMg01no092_h06.b1 CHROMAT_FILE:
MSMg01no092_h06.b1 PHD_FILE: MSMg01no092_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:19 2005
(420 letters)
>mm_chr10_44294096_44294915
Length = 820
Score = 781 bits (404), Expect = 0.0
Identities = 413/416 (99%)
Strand = Plus / Minus
Query: 5 gaattccttactcactcttccagatccttccctccttccctcttcctaattccaagccac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaattccttactcactcttccagatccttccctccttccctcttcctaattccaagccac 561
Query: 65 caatgagtactgagagggagagcaatcttacgtacacagatgtgtattagtttgctcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caatgagtactgagagggagagcaatcttacgtacacagatgtgtattagtttgctcact 501
Query: 125 atacacactataaatgtctaggtccttgttgacagggaagaacaagccagaggccggaga 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 atacacactataaatgtctaggtccttgttgacagtgaagaacaagccagaggccggaga 441
Query: 185 gtcaggctagataagtgtgaggtaggcaggagtgctgaaaaagaacagatcaagatagac 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 440 gtcaggctagataagtgtgaggtaggcaggagtgctgaaaaagaagagatcaagatacac 381
Query: 245 caataacagaagtgttgccatgagtaaccaggacaccaacttaagggcaatggtgctagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caataacagaagtgttgccatgagtaaccaggacaccaacttaagggcaatggtgctagt 321
Query: 305 tggcaagaggagtctaggtgcatctgacaaccagagatgggggaaaataccatctagtgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggcaagaggagtctaggtgcatctgacaaccagagatgggggaaaataccatctagtgc 261
Query: 365 ccagcactctgccatagaacaaagactgggtgtggagccactctcacagctgagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccagcactctgccatagaacaaagactgggtgtggagccactctcacagctgagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_h06.g1 MSMg01no092_h06.g1 CHROMAT_FILE:
MSMg01no092_h06.g1 PHD_FILE: MSMg01no092_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:19 2005
(438 letters)
>mm_chr10_44177281_44178119
Length = 839
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 cctgaagaga-ttcctttaggagccctcagccacaaatagcactttctatttaaatgtga 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgaagagaattcctttaggagccctcagccacaaatagcactttctatttaaatgtga 260
Query: 60 aagtgcatgaattcccagaagtcactgaagtggcacattttactgtaactaaagttatac 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aagtgcatgaattcccagaagtcactgaagtggcacagtttactgtaactaaagttatac 320
Query: 120 agaagacttggggatcctcctcttatctgccctcggaaaaagtcctttccaaagaggaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagacttggggatcctcctcttatctgccctcggaaaaagtcctttccaaagaggaaa 380
Query: 180 agcaagaaagataaaacagcctctgcaacgtattcccacatagacgccgcagataaaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaagaaagataaaacagcctctgcaacgtattcccacatagacgccgcagataaaaat 440
Query: 240 taggaataaggataaccatgttagaacgcgcgcttgtgaaaatgtaaacacagtacagcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggaataaggataaccatgttagaacgcgcgcttgtgaaaatgtaaacacagtacagcg 500
Query: 300 ggagtccttctccggagctggtctttacaattcgtccctagataggacgctccgagaagg 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagtccctctccggagctggtctttacaattcgtccctagataggacgctccgagaagg 560
Query: 360 ggaaagatgcttacttgtccttgtcccgggcacaacttaaactatctcattcttatttag 419
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ggaaagatgcttacttgtccttgtcccgggtacaacttaaactatctcattcttatttag 620
Query: 420 ttccaacatgtaaggtcat 438
|||||||||||||||||||
Sbjct: 621 ttccaacatgtaaggtcat 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
