GCGGCGCTAAACACTCCTATATCGAGAGGATCCGCGGAATTCTTGCAATC
ACCTCTCTCNAAATTTGATGAAAATATTAATACCCATTAATGTCTCTTTC
ATTTTTCCCAAGTAAACTCCTGTGTTCATACATCCCTGTATCCAAACTAA
GAAACAGTAAAATGTCAAAATACTGATGAAGAGAATTTATAAATTAAGCA
CAAGATTGAATACAACAAATTTTTATTTCAAAGCCATTATAAGTTAGGTT
ACTAATGACATACATATCTACATTCAATTACATACAATAGCTAAAGTTTC
ATTCAATTACATGAAATATTTTGCTACCAACAACACATATGAAAATGAAC
AAGAAAATATTTCCATATTACTTTTAAAAATAGAGGTTGATGTTATATTT
TTAACAACCATAAAAGCTATTTTAATGGCATCAAATATGGAAATTTCTTA
ACATGAAATAATTATTTCTGCTAATGATAGTCGCTGTTCAAGATTTATTT
GTTACCTGTCATGATCATGTGTTAACATTACTGTCCATGAGGAAGTTAAA
CTTTCACAAAGTGCTATCCTTTACCTCTGAAAGTCTTAATGATTTTTTTC
CTCTGTTGAATAATACGAAGAAGAAAACATAAATAAATTAACATTGATAG
ATGTTCTTAGAATTTCTCGTATTTGG

TATTTTTTTTTTATTTTCCTCTTCCCCTCCCCCAACCAAANNNNNAAGTT
NNNNNNNCCCATGATATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCC
ATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCT
TTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGAT
CCTTTCCCAATCTGTTGGTGGTCCTTTTGTCCTATTGACGGTGTCTTTTG
CCTTGCAGAAACTTTGGAGTTTCATGAGGTCTTCTGAGATCTTCTTTACA
CAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCA
ATAGTCAACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAG
TGAAAGATCTGTATGATTAAAAACTTCAAGTCTCTGAAGAAAGAAGTTAA
AGATATGTGAAAGTTGGAAATATTCTCCCATTCTCATGGATTGTCTTTTT
TTTTGAAGGATTTGAGTCCCATTGGATTTACGAAAATATTATAGGAAAAG
TAAATTGTTACTTGGCTATTAATTTTTTGGTGGTTAAAGGTTGAAATTCC
AATTCTTGGGGGGCCCCCTTCTTTTTAAGGTTTGTTTAAGGGAATAATTT
TCCGGGGTTTTTTCTTAGGGGGGGGGGAATCCTAACCCCGGGGTTTTTCT
TTTTTTTTCCCGTAATTTTCCC

Query= MSMg01no094_a06.b1 MSMg01no094_a06.b1 CHROMAT_FILE:
MSMg01no094_a06.b1 PHD_FILE: MSMg01no094_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:29 2005
         (606 letters)



>mm_chr10_113506333_113507339
          Length = 1007

 Score = 1151 bits (595), Expect = 0.0
 Identities = 604/607 (99%), Gaps = 1/607 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttgatgaaaatattaatacccattaatgtctctttcatttttcc-caagtaaactcct 59
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 807 atttgatgaaaatattaatacccattaatgtctctttcatttttccaaaagtaaactcct 748

                                                                       
Query: 60  gtgttcatacatccctgtatccaaactaagaaacagtaaaatgtcaaaatactgatgaag 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gtgttcatacatccctgtatccaaactaagaaacagtaaaatgtcaaaatactgatgaag 688

                                                                       
Query: 120 agaatttataaattaagcacaagattgaatacaacaaatttttatttcaaagccattata 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agaatttataaattaagcacaagattgaatacaacaaatttttatttcaaagccattata 628

                                                                       
Query: 180 agttaggttactaatgacatacatatctacattcaattacatacaatagctaaagtttca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 agttaggttactaatgacatacatatctacattcaattacatacaatagctaaagtttca 568

                                                                       
Query: 240 ttcaattacatgaaatattttgctaccaacaacacatatgaaaatgaacaagaaaatatt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttcaattacatgaaatattttgctaccaacaacacatatgaaaatgaacaagaaaatatt 508

                                                                       
Query: 300 tccatattacttttaaaaatagaggttgatgttatatttttaacaaccataaaagctatt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tccatattacttttaaaaatagaggttgatgttatatttttaacaaccataaaagctatt 448

                                                                       
Query: 360 ttaatggcatcaaatatggaaatttcttaacatgaaataattatttctgctaatgatagt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttaatggcatcaaatatggaaatttcttaacatgaaataattatttctgctaatgatagt 388

                                                                       
Query: 420 cgctgttcaagatttatttgttacctgtcatgatcatgtgttaacattactgtccatgag 479
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgctattcaagatttatttgttacctgtcatgatcatgtgttaacattactgtccatgag 328

                                                                       
Query: 480 gaagttaaactttcacaaagtgctatcctttacctctgaaagtcttaatgatttttttcc 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaagttaaactttcacaaagtgctatcctttacctctgaaagtcttaatgatttttttcc 268

                                                                       
Query: 540 tctgttgaataatacgaagaagaaaacataaataaattaacattgatagatgttcttaga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tctgttgaataatacgaagaagaaaacataaataaattaacattgatagatgttcttaga 208

                  
Query: 600 atttctc 606
           |||||||
Sbjct: 207 atttctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space:   594212
Effective search space used:   594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)