Query= MSMg01no094_b11.b1 MSMg01no094_b11.b1 CHROMAT_FILE:
MSMg01no094_b11.b1 PHD_FILE: MSMg01no094_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:35 2005
(294 letters)
>mm_chr10_111189049_111189743
Length = 695
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%), Gaps = 1/295 (0%)
Strand = Plus / Minus
Query: 1 ccgatggctaaacccatggggtaaaaacaaaagctatactattatttcaggaaaagc-ca 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 329 ccgatggctaaacccatggggtaaaaacaaaagctatactattatttcaggaaaagcaaa 270
Query: 60 actacagtaagcttaggagtcagcttttctgttctttaggttagagtggcaggattgata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 actacagtaagcttaggagtcagcttttctgttctttaggttagagtggcaggattgata 210
Query: 120 aagcatcgtgctgaccctgatctcaagagcctcctgcctctgccaaccaagtgctaagac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aagcatcgtgctgaccctgatctcaagagcctcctgcctctgccaaccaagtgctaagac 150
Query: 180 aagaggcatacactagcgtacttggctgagctagctcccttcagatttcaatgcacagac 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aagaggcatacactagcatacttggctgagctagctcccttcagatttcaatgcacagac 90
Query: 240 ctgtttcaagcagctgccactccagatgaaatttgaactaggatgcctgtcagct 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ctgtttcaagcagctgccactccagatgaaatttgaactaggatgcctgtcagct 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 695
Length adjustment: 9
Effective length of query: 285
Effective length of database: 686
Effective search space: 195510
Effective search space used: 195510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_b11.g1 MSMg01no094_b11.g1 CHROMAT_FILE:
MSMg01no094_b11.g1 PHD_FILE: MSMg01no094_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:35 2005
(439 letters)
>mm_chr10_111053702_111054540
Length = 839
Score = 791 bits (409), Expect = 0.0
Identities = 430/437 (98%)
Strand = Plus / Plus
Query: 3 tttgtagtccaggctggcctcagacttacagagatacgcctgcatctatctctgagtgtt 62
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 203 tttgtagtccaggctggcctcagacttacagagatacgcctgcatctgtctctgagtgtt 262
Query: 63 gagattaaagtcgtgtgtcaccactgtcctgtattccttttaaagggactagagtctgga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagattaaagtcgtgtgtcaccactgtcctgtattccttttaaagggactagagtctgga 322
Query: 123 gatttcactccttttgtatttttttttttggtcttgttcactggtgctctgacagaactc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gatttcactccttttgtatttttttttttggtcttgttcactggtgctctgacagaactc 382
Query: 183 agtctcttgcacacaccagacaagcattgtacatagacctatgttcatggcccctttaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agtctcttgcacacaccagacaagcattgtacatagacctatgttcatggcccctttaat 442
Query: 243 ttcttcacatcacttggctggaccttcaaggcttctgtaattatttgagaaaggggtttc 302
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcttcacatcatttgactggaccttcaaggcttctgtaattatttgagaaaggggtttc 502
Query: 303 tgcttccctcttgctccctctcccccacctctggtcttggacacagggtctccctgtatc 362
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 503 tgcttccctcttgctccctctcccccacctctggtcttggagacagggtctccctgtagc 562
Query: 363 tcatgctctccttgattttgaatggtagctgaggatggccttggacttctgatcttcctg 422
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 563 tcatgctctccttgattttgaatggtagctgaggatggccttagacttttgatcttcctg 622
Query: 423 cctccacctcctgagta 439
|||||||||||||||||
Sbjct: 623 cctccacctcctgagta 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
