Query= MSMg01no094_n08.b1 MSMg01no094_n08.b1 CHROMAT_FILE:
MSMg01no094_n08.b1 PHD_FILE: MSMg01no094_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:39 2005
(456 letters)
>mm_chr10_50467975_50468831
Length = 857
Score = 803 bits (415), Expect = 0.0
Identities = 442/451 (98%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 7 attccttctta-caaaaacatgttctccatactacccgttttaatatatacaataagaga 65
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 483 attccttcttagtaaaaacatgttctccatactacccattttaatatatacaataagaga 424
Query: 66 aaaatatatcatgacaatcagaagctccccttagtgattacagactgaaaggaaataatg 125
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaatatatcatgataatcagaagctccccttagtgattacagactgaaaggaaataatg 364
Query: 126 ttgtctaaattggttcagatcttattatattttaaaaaatacttacctttctggttctgc 185
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgtctaaattgattcagatcttattatattttaaaaaatacttacctttctggttctgc 304
Query: 186 atttaaaactgagaaaatacaaacaaaaaacatctgatacagtactagcagacagaaatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atttaaaactgagaaaatacaaacaaaaaacatctgatacagtactagcagacagaaatt 244
Query: 246 attccaaaaaaagctttcatactgatcttagtacccattgaggaagtcacatgacttctc 305
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 243 attccaaaaaaagctttcatactgatcttagtacccattgaagaagtcacatgacttctc 184
Query: 306 tgagccttagtttctttatctgtaaattagaataatagtaatctgatatatgcttttaaa 365
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 183 tgagccttagtttctttatctgtaaattagaataatggtaatctgatatatgcttttaaa 124
Query: 366 ttctccgattatagccatgtaataatagctactgttaattttatataccaatttcctgaa 425
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttctccgattagagccatgtaataatagctactgttaattttatataccaatttcctgaa 64
Query: 426 ggttaataagagtttgaagatacttgaagga 456
|||||| ||||||||||||||||||||||||
Sbjct: 63 ggttaagaagagtttgaagatacttgaagga 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 857
Length adjustment: 10
Effective length of query: 446
Effective length of database: 847
Effective search space: 377762
Effective search space used: 377762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_n08.g1 MSMg01no094_n08.g1 CHROMAT_FILE:
MSMg01no094_n08.g1 PHD_FILE: MSMg01no094_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:39 2005
(443 letters)
>mm_chr10_50352249_50353091
Length = 843
Score = 787 bits (407), Expect = 0.0
Identities = 430/447 (96%), Gaps = 16/447 (3%)
Strand = Plus / Plus
Query: 1 agagcaaaggaatctcgaatggccgagaaccacttaaagaaatgttcaaagtcctcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagcaaaggaatctcgaatggccgagaaccacttaaagaaatgttcaaagtcctcagtg 260
Query: 61 atcaggaaatgcaaatcaaaatgtccctgagactccatcttacaccagtcagaatggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaggaaatgcaaatcaaaatgtccctgagactccatcttacaccagtcagaatggcta 320
Query: 121 agatcaaaaactcaggtgacagtagatgctggcaaggatgctggtgggattgcaagctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatcaaaaactcaggtgacagtagatgctggcaaggatgctggtgggattgcaagctag 380
Query: 181 tggttttctactagaatttgccatttgtgaacaagaaacacagtttgtattaagtagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttttctactagaatttgccatttgtgaacaagaaacacagtttgtattaagtagctg 440
Query: 241 agtggttaaggatatgaatatgcaaggttagctctggcaggattattttcttatagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtggttaaggatatgaatatgcaaggttagctctggcaggattattttcttatagaaga 500
Query: 301 aatgaccccattttaaaaattcacagaatcttaagactagtccataccatccatccatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgaccccattttaaaaattcacagaatcttaagactagtccataccatccatccatct 560
Query: 361 ttccatccatctatccatccgtccatccgtccatccatccatc----catccatccatcc 416
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 ------------atccatccgtccatccgtccatccatccatctatccatccatccatcc 608
Query: 417 atccatccatctatatagtgtttcctg 443
||||||||||||||||| |||||||||
Sbjct: 609 atccatccatctatatactgtttcctg 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
