Query= MSMg01no095_c22.b1 MSMg01no095_c22.b1 CHROMAT_FILE:
MSMg01no095_c22.b1 PHD_FILE: MSMg01no095_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:07 2005
(577 letters)
>mm_chr10_127146771_127147747
Length = 977
Score = 977 bits (505), Expect = 0.0
Identities = 568/613 (92%), Gaps = 39/613 (6%)
Strand = Plus / Plus
Query: 4 ggaattctctaactgatatgaacaccgaaccctaaataaaacaaaacaaaacaa------ 57
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggaattctctaacagatatgaacaccgaaccctaaataaaacaaaacaaaacaaaacaaa 224
Query: 58 -caacaacaacaacaacaacaa-------------------aaaacactttaaaaattcg 97
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 225 acaacaacaacaacaacaacaacaacaacaacaacaacaacaaaacactttaaaaattcg 284
Query: 98 tttatcattgtaggagtatgttatccccaaccaaagaaggcaagggatgagcctaagtca 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttatcattgtaggagtatgttatccccaaccaaagaaggcaagggatgagcctaagtca 344
Query: 158 tgaccaggggcaagggtcgtgaggtgccaggctgatgcattctagagagcaggtgctaac 217
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgaccaggggcaagggtcatgaggtgccaggctgatgcattctagagagcaggtgctaac 404
Query: 218 attcggccctaccttctctctgtacgcccagaggccctaaagcttgaggaggacacgagt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 attcggccctaccttctctctgtacgcccagaggccctaaagcttgaggaggacacgagt 464
Query: 278 gtatacggctacctgaatggggaggtgtccaaggtgaatggtatggacgacgcctccaac 337
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 465 gtatacggctacctgaatggggaggtgtccaaggtgaacggtatggacgacgcctccaac 524
Query: 338 ttcagggctgtgcaggtgagtgtccagcgtggacaggcttgggcccccaggtcatcctct 397
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 525 ttcagggctgtgcaggtgagtgtccagcgtggacaggcttgggcccccaggccatcctct 584
Query: 398 gagcctaggacttgtgag-------------ccacagccccactagctcagcttgacttt 444
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 585 gagcctaggacttgtgagtggaggccctgggccacagccccactagctcagcttgacttt 644
Query: 445 cgctctcttcccaagtatgcaatgtcagtgattggcttctcagaggaggaaattagacaa 504
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cgctctcttcccaagcatgcgatgtcagtgattggcttctcagaggaggaaattagacaa 704
Query: 505 gtgctggaggtgacagccctggtgctgaagctggggaacgtgaagctgacagacgagttc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gtgctggaggtgacagccctggtgctgaagctggggaacgtgaagctgacagacgagttc 764
Query: 565 caggccaatggga 577
|||||||||||||
Sbjct: 765 caggccaatggga 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_c22.g1 MSMg01no095_c22.g1 CHROMAT_FILE:
MSMg01no095_c22.g1 PHD_FILE: MSMg01no095_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:07 2005
(275 letters)
>mm_chr10_127316435_127317109
Length = 675
Score = 503 bits (260), Expect = e-147
Identities = 272/276 (98%), Gaps = 2/276 (0%)
Strand = Plus / Minus
Query: 1 acaggtgaaggaacaaggagtcactggggaaatgaaatctgccattcatccagcccagga 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 475 acaggtgaaggaacaaggagccactggggaaatgaaatctgccattcatccagcccagga 416
Query: 61 acccttgggtcttctgttagctagatgtgggcaaggatgagaattattaggtcctgttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acccttgggtcttctgttagctagatgtgggcaaggatgagaattattaggtcctgttgg 356
Query: 121 ctgcagacaattttcttacccctgcttcattgctgaaataagacagtgaaagagagtcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgcagacaattttcttacccctgcttcattgctgaaataagacagtgaaagagagtcca 296
Query: 181 ggcaactactgcagaagcgggagtctggacaggagccagagggagaa-acgcagcaggag 239
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 295 ggcaactactgcagaagcgggagtctggacaggagccagagggagaaga-gcagcaggag 237
Query: 240 gctgttgatgtgttggagcagggtgtgggggtgaag 275
|||| |||||||||||||||||||||||||||||||
Sbjct: 236 gctggtgatgtgttggagcagggtgtgggggtgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
