Query= MSMg01no095_j24.b1 MSMg01no095_j24.b1 CHROMAT_FILE:
MSMg01no095_j24.b1 PHD_FILE: MSMg01no095_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:42 2005
(330 letters)
>mm_chr10_65285325_65286054
Length = 730
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%)
Strand = Plus / Plus
Query: 11 gaattcctttactatctagagactgtccataagttctgtgactctagagaaccctgacta 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattcctttactatctagagactgtccataagttctgtgactctagagaaccctgacta 270
Query: 71 atacaccatgctaaaacaaaaacatcaccatactatttttaggatgttaaaaaggttttg 130
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atacacaatgctaaaagaaaaacatcaccatactatttttaggatgttaaaaaggttttg 330
Query: 131 aacaatgaaagaaaatgctaaatagtttgagtaaaatacagacttgcttgacaatgaaca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aacaatgaaagaaaatgctaaatagtttgagtaaaatacagacttgcttgacaatgaaca 390
Query: 191 tcattttgcaaacagtgaaatggttgccactcttattttttccagggtaattgcaaaaga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcattttgcaaacagtgaaatggttgccactcttattttttccagggtaattgcaaaaga 450
Query: 251 ctgttcacaggaccaatgagttgttcctcagtgaatgagcatcatatgggcagcatttca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctgttcacaggaccaatgagttgttcctcagtgaatgagcatcatatgggcagcatttca 510
Query: 311 tagagggaacatattgc 327
| |||||||||||||||
Sbjct: 511 ttgagggaacatattgc 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_j24.g1 MSMg01no095_j24.g1 CHROMAT_FILE:
MSMg01no095_j24.g1 PHD_FILE: MSMg01no095_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:42 2005
(244 letters)
>mm_chr10_65114114_65114757
Length = 644
Score = 458 bits (237), Expect = e-133
Identities = 240/241 (99%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 1 aatgaaatacagctttgttcttgtgtaaacagggcagtagctctaataaacctagcctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgaaatacagctttgttcttgtgtaaacagggcagtagctctaataaacctagcctgc 260
Query: 61 aaatagaagtgctagaaaaggaagagaaagtggaacaggggagggaatggaggagagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatagaagtgctagaaaaggaagagaaagtggaacaggggagggaatggaggagagatg 320
Query: 121 aggtagagacagaaacagacatagatacatgtacatatagatgatagatagagagataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtagagacagaaacagacatagatacatgtacatatagatgatagatagagagataga 380
Query: 181 tagatagatgatagatagatagatagatagatagatagatagatagattagatagataga 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 tagatagatgatagatagatagatagatagatagatagatagatagat-agatagataga 439
Query: 241 t 241
|
Sbjct: 440 t 440
Score = 83.9 bits (43), Expect = 8e-21
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 175 gatagatagatagat-gatagatagatagatagatagatagatagatagatagat 228
||||||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gatagataggtaggtagatagatagatagatagatagatagatagatagatagat 644
Score = 81.9 bits (42), Expect = 3e-20
Identities = 86/104 (82%), Gaps = 12/104 (11%)
Strand = Plus / Plus
Query: 141 atagatacatgtacata--tagatga-tagatagagagatagata---gatagat-gata 193
||||||| ||| ||| ||||| | |||||||| | |||| || ||||||| | ||
Sbjct: 546 atagatagatg---ataggtagataattagatagata-ataggtagctgatagataggta 601
Query: 194 gatagatagatagatagatagatagatagatagattagatagat 237
| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 602 ggtagatagatagatagatagatagatagatagat-agatagat 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 114
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 4
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
