Query= MSMg01no095_l14.b1 MSMg01no095_l14.b1 CHROMAT_FILE:
MSMg01no095_l14.b1 PHD_FILE: MSMg01no095_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:50 2005
(332 letters)
>mm_chr10_67771891_67772622
Length = 732
Score = 429 bits (222), Expect = e-125
Identities = 243/250 (97%)
Strand = Plus / Plus
Query: 6 gaattcctgactgtggccctcagcacctatttgaaagcctggtgttactaagggtaagtg 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcctgactggggtcctcagcacctatttgaaagcctggtgttactaagggtaagtg 265
Query: 66 taacaaaataataacccgaagggtgatagaggaagacattgtgatatcaacttcagtagc 125
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 taacaaaataataaggtgaagggtgatagaggaagacattgtgatatcaacttcagtagc 325
Query: 126 atcttacccccaccgtgtatattatatacacacatgcataacaataaaaataaaaataaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atcttacccccaccgtgtatattatatacacacatgcataacaataaaaataaaaataaa 385
Query: 186 tagatatagagacccagtgttggtgacattgtactcatgaaagagaagagaataaaagtc 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagatatagagacccagtgttggtgacattgtactcatgaaagagaagagaataaaagtt 445
Query: 246 cgcaattgtt 255
|||||||||
Sbjct: 446 ggcaattgtt 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_l14.g1 MSMg01no095_l14.g1 CHROMAT_FILE:
MSMg01no095_l14.g1 PHD_FILE: MSMg01no095_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:50 2005
(288 letters)
>mm_chr10_67870784_67871470
Length = 687
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 cttaataaactaaacagccctaaacaacatcgagaggccagtaaaaatgccttccaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 487 cttaataaactaaacagccctaaacaacatcgagaggccagtaaaaatggcttccaatca 428
Query: 61 gtcctttcctggtctttctcccacaagcatgttctcctgactgccctgcttatgtggtag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gt-ctttcctggtctttctcccacaagcatgttctcctgactgccctgcttatgtggtag 369
Query: 121 aatctacaagtggtccttaccagtctgtgccaggattctcataggctgaaaaaaaaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatctacaagtggtccttaccagtctgtgccaggattctcataggctgaaaaaaaaaaat 309
Query: 181 ggccacatttcccagaattctctgcaacttaaatcccacaaagggcattcctcgacttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggccacatttcccagaattctctgcaacttaaatcccacaaagggcattcctcgacttcc 249
Query: 241 tttaccctgcctagcatggagatgaaggagttttaccatggcatgtta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttaccctgcctagcatggagatgaaggagttttaccatggcatgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
