Query= MSMg01no096_h12.b1 MSMg01no096_h12.b1 CHROMAT_FILE:
MSMg01no096_h12.b1 PHD_FILE: MSMg01no096_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:50 2005
(512 letters)
>mm_chr10_82464889_82465800
Length = 912
Score = 592 bits (306), Expect = e-173
Identities = 324/332 (97%), Gaps = 4/332 (1%)
Strand = Plus / Minus
Query: 181 gcaggcaaaacaccaaggtgattaaaattaaaaaaattatttttaaatgacatttttaga 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 912 gcaggcaaaacaccaaggtgattaaaatttaaaaaattatttttaaatgacatttttaga 853
Query: 241 agtgaattctctttcaaaagtctcttttatacatttgagttcatttcataatcagaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 agtgaattctctttcaaaagtctcttttatacatttgagttcatttcataatcagaaatc 793
Query: 301 tgagcatgtgctcacacacacatgcacatacatgtgcacacacacacacacacacacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tgagcatgtgctcacacacacatgcacatacatgtgcacacacacacacacacacacaca 733
Query: 361 cacacgcatgcacacaccacacacttgagtgtgcccacacacaccaaatgctttattgag 420
| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 732 c----gcatgcacacaccacacacttgaatgtgcccacacataccaaatgctttattgag 677
Query: 421 gcgctgtcgagtagacaagagggttggcggtagacaaggagcctaccaagggtggtgcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gcgctgtcgagtagacaagagggttggcggtagacaaggagcctaccaagggtggtgcta 617
Query: 481 ccaatccatcagatcaattttacaccaagccc 512
||||||||||||||||||||||| ||||||||
Sbjct: 616 ccaatccatcagatcaattttactccaagccc 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_h12.g1 MSMg01no096_h12.g1 CHROMAT_FILE:
MSMg01no096_h12.g1 PHD_FILE: MSMg01no096_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:50 2005
(506 letters)
>mm_chr10_82374492_82375397
Length = 906
Score = 828 bits (428), Expect = 0.0
Identities = 484/506 (95%), Gaps = 7/506 (1%)
Strand = Plus / Plus
Query: 1 tcctgcctgtatgccagagaaggctctcaggatgagcccgtaggaaatgcagtcgaagtt 60
||||||||||| | |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 208 tcctgcctgtacggcagagaaggctctcaggatgagcccgtaggaaatgc--t-----tt 260
Query: 61 tattacgaagagatttcaacagaggcttgggcacaggggttactagaaagagaggcactc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattacggagagatttcaacagaggcttgggcacaggggttactagaaagagaggcactc 320
Query: 121 ggagacagcacgagacacatgtaagggtgagtgcgggtttcccaggaaagccacacccaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ggagacagcacgagacacaggtaagggtgagtgcgggtttcccaggaaagccacatccaa 380
Query: 181 gtgtttttgcagtggctgtatccaggtatcttatgctgtcaaggtccagggggcacacac 240
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 381 gtgtttttgcagtggctgtatccaggtatcttacgctgtcaaggtccagggtgcacacac 440
Query: 241 agaacgaggtcacagtgtcagcttctcatcccactttgcatgggtccaagtgaggagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaacgaggtcacagtgtcagcttctcatcccactttgcatgggtccaagtgaggagcca 500
Query: 301 gtaagccaccgcatgtgtcctgggaagtagaagtgtccttcccatgcctgccatgatgag 360
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||
Sbjct: 501 gtaagccaccgcatgtgtcctgggaagtagaaatgtccttcccatggctgccatgacgag 560
Query: 361 tcactacccaatcagtggcttacagaggccaagtttattctcttaactgttgtagaggct 420
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 561 tcactacccaatcagtggcttacagaggtcaagtttattctcttaaccgttgtagaggct 620
Query: 421 gtaggcagagctgcatccgcctgcttgcctcaccgggcttctagacatcatggcttctct 480
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 gtaagcagagctgcatccgcctgcttgcctcaccgggcttctagacaccatggcttctct 680
Query: 481 cactgtgtgacactcttctgtgtgtc 506
||||||||||| ||||||||||||||
Sbjct: 681 cactgtgtgaccctcttctgtgtgtc 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
