Query= MSMg01no097_l03.b1 MSMg01no097_l03.b1 CHROMAT_FILE:
MSMg01no097_l03.b1 PHD_FILE: MSMg01no097_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:31 2005
(505 letters)
>mm_chr10_48515738_48516642
Length = 905
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 8 acatctcttcccattggctgctagtcctcagctattgcttcacctcaggttgtgcaaact 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acatctcttcccattggctgctagtcctcagctattgcttcacctcaggttgtgcaaact 716
Query: 68 tccatgcttccta-aataatgattgatggactaaacctttgaaactgtaaataaatccct 126
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tccatgcttcctacaataatgattgatggactaaacctttgaaactgtaaataaatccct 656
Query: 127 aattatatacttccgttatgagagttgtgctgatcatgggctgttcattaacaataaagt 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 655 aattatatacttccgttatgagagttgtgctgatcatgggctgttcattaacaataaact 596
Query: 187 agtgactaagacaatcaattgcattgtgttactgtacataagcaagcaaaaggagaaaga 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agtgactaagacaatcaattgcattgtgttactgtacataagcaagcaaaaggagaaaga 536
Query: 247 agttttatgtgcatagggttctagggagatgtgcccaagatggtagagcagaggcatgcc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agttttatgtgcatagggttctagggagatgtgcccaagatggtagagcagaggcatgcc 476
Query: 307 attctgaaacaggtatgagagagcaacagtttgcatattttcaacatgtatgaagcagca 366
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 475 attctgaaacaggtatgagagagcaacagtttgcatattttcagcatgcatgaagcagca 416
Query: 367 tatgaaccaagactaaggccttaagctctcaaagtctactcccagtgatatctttctcca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tatgaaccaagactaaggccttaagctctcaaagtctactcccagtgatatctttctcca 356
Query: 427 aaatggccacattagctaactattctcaaatagcaccataaatgggaaacatttcacatt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaatggccacattagctaactattctcaaatagcaccataaatgggaaacatttcacatt 296
Query: 487 gaaatagttatggaatact 505
|||||||||||||||||||
Sbjct: 295 gaaatagttatggaatact 277
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_l03.g1 MSMg01no097_l03.g1 CHROMAT_FILE:
MSMg01no097_l03.g1 PHD_FILE: MSMg01no097_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:32 2005
(382 letters)
>mm_chr10_48449956_48450737
Length = 782
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%), Gaps = 2/383 (0%)
Strand = Plus / Plus
Query: 1 ttttcc-aatacttgtgaacatgaacatgggttcagtagatgaaaaagcctaaaatctag 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttccaaatacttgtgaacatgaacatgggttcagtagatgaaaaagcctaaaatctag 260
Query: 60 tgtgctctctaactgataacatagtggttagcagaacacaaagtacatatggtatctacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgctctctaactgataacatagtggttagcagaacacaaagtacatatggtatctacc 320
Query: 120 ctgtggatgggtaaagtctaggggaaaaaaaagagtctgaattaattattctggggtatt 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtggatgggtaaagtcta-gggaaaaaaaagagtctgaattaattattctggggtatt 379
Query: 180 tgggtctgtcccatcagatagcaaaatagtcacatggtaatatttgatattgttacttcc 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 tgggtctgtcccatcagatagcaaaatagtcacatggcaatatttgatattgttacttcc 439
Query: 240 attaagatgacaccctgcatggttagtgttattggttctcttggtgcttctctaagtata 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attaagaagacaccctgcatggttagtgttattggttctcttggtgcttctctaagtata 499
Query: 300 agaacctctgtgcccttaaagagattgggtactcttatggaagagatgggagaatgatta 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaacctctgtgccctcaaagagattgggtactcttatggaagagatgggagaatgatta 559
Query: 360 aagaccatgaaggtgatgagaac 382
|||||||||||||||||||||||
Sbjct: 560 aagaccatgaaggtgatgagaac 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
