Query= MSMg01no101_d12.b1 MSMg01no101_d12.b1 CHROMAT_FILE:
MSMg01no101_d12.b1 PHD_FILE: MSMg01no101_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:21 2005
(345 letters)
>mm_chr10_17788576_17789320
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Plus
Query: 1 agcagtctttgaagtgatgctaaacaagtgcactaggtgactagtcaaggtctgtgaaca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagtctttgaagtggtgctaaacaagtgcactaggtgactagtcaaggtctgtgaaca 260
Query: 61 caccaactcagggctaaagtattgctgtttcaaggctgttggcctatgttggttttggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccaactcagggctaaagtattgctgtttcaaggctgttggcctatgttggttttggtt 320
Query: 121 ttttgtttttaaaggcactggcagctttcctcctatgtccagctccatcctgattgttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgtttttaaaggcactggcagctttcctcctatgtccagctccatcctgattgttgt 380
Query: 181 cctaacatggactttatgcctcagctcagcagcctgtgatctgtttgttacagagcttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaacatggactttatgcctcagctcagcagcctgtgatctgtttgttacagagcttgt 440
Query: 241 gctatttagtatttgcttcttatcaggctgctccctcgtttggaaccccctccttccgct 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctatttagtagttgcttcttatcaggctgctccctcgtttggaaccccctccttccgct 500
Query: 301 cccagggtcttcctcgtcctttatgaactatcttcactttggtag 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccagggtcttcctcgtcctttatgaactatcttcactttggtag 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_d12.g1 MSMg01no101_d12.g1 CHROMAT_FILE:
MSMg01no101_d12.g1 PHD_FILE: MSMg01no101_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:21 2005
(287 letters)
>mm_chr10_17935369_17936055
Length = 687
Score = 480 bits (248), Expect = e-140
Identities = 278/288 (96%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 gtgccagtaacacaacttttaaggggtccttccacagcctatgaagtgaagcgaacgcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 356 gtgccagtaacacaacttttaaggggtccttccacagtctatgaagtgaagcgcacgcag 297
Query: 61 tgtagagctaacttgaaggaaaacatcgagacacagggaggttattttgattttgatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgtagagctaacttgaaggaaaacatcgagacacagggaggttattttgattttgatatt 237
Query: 121 tcagactgaagcaatgactcagggaacttttcaaac-ttttttttaaagatttatttatt 179
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 236 tcagactgaagcaatgactcagggaacttttcaaacttttttttttaagatttatttatt 177
Query: 180 attataatatctaagtgcactgtagctgtcttcagatgcaccagaagagggcgtcagatc 239
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 176 attataatatctaagtacactgtagctgtcttcagatgcaccagaagagggtgtcagatc 117
Query: 240 tcattatattttgttgtgagccaccatgtgattttttaaaaacatgtt 287
|||||||| | |||||||||||||||||| |||||||||||||||||
Sbjct: 116 tcattatagatggttgtgagccaccatgtggttttttaaaaacatgtt 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
