Query= MSMg01no102_b02.b1 MSMg01no102_b02.b1 CHROMAT_FILE:
MSMg01no102_b02.b1 PHD_FILE: MSMg01no102_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:32 2005
(475 letters)
>mm_chr10_53496985_53497859
Length = 875
Score = 795 bits (411), Expect = 0.0
Identities = 461/493 (93%), Gaps = 26/493 (5%)
Strand = Plus / Plus
Query: 6 gaattccttatgttc-tcctcaggcacagttgcatatatggtaagtgaggttatggaaat 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccttatgg-cgtcctcaggcacagttgcatatatggtaagtgaggttatggaaat 264
Query: 65 aaaaggatgctgagagttttcccagggcagagtggaggctttgcgggaattagagctcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaggatgctgagagttttcccagggcagagtggaggctttgcgggaattagagctcat 324
Query: 125 ctgtcttctgaaccagtttaacacactctatcccaaccaagctgtgctgagctcctgtga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgtcttctgaaccagtttaacacactctatcccaaccaagctgtgctgagctcctgtga 384
Query: 185 aatggagtttgcatccttcaggttagtacctctggaaagcagagaaccctggtgggctat 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 385 aatggagtttgcatccttcaggttagtacctctggaaagcagagaactctggtgggctat 444
Query: 245 gtttacttttgctgaaattct------------------------cccctccccttcgtt 280
||||||||||||||||||||| |||||||||||| ||
Sbjct: 445 gtttacttttgctgaaattctatgatatgttttgttctttctcctcccctccccttcctt 504
Query: 281 cccctcccctcccgctccttttttctccttctctcttctcccctcttccccccaattctc 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cccctcccctcccgctccttttttctccttctctcttctcccctcttccccccaattctc 564
Query: 341 ccctctcctatagtcccccttttcttccccttagcctcccgttttctttcctctttattt 400
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 565 ccctctcctatcgtcccccttttcttccccttagcctcccattttctttcctctttattt 624
Query: 401 cctcccctctactctttccctcccctctctccatcccattgcctcttctgttcttcctcc 460
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 cctcccctctactctttccctcccctctctccatcccatttcctcttctgttcttcctcc 684
Query: 461 ccttgccctccca 473
|||||||||||||
Sbjct: 685 ccttgccctccca 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_b02.g1 MSMg01no102_b02.g1 CHROMAT_FILE:
MSMg01no102_b02.g1 PHD_FILE: MSMg01no102_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:32 2005
(200 letters)
>mm_chr10_53644993_53645592
Length = 600
Score = 364 bits (188), Expect = e-105
Identities = 197/200 (98%)
Strand = Plus / Minus
Query: 1 aggctgagtcactgggaatttcacttccctctctctttcagatcatgtgtcagttggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 400 aggctgagtcactgggaatttcacttccctctctctttcagatcatgtgtcggttggagg 341
Query: 61 actcggagacagcttttatgaatatttgcttaaggcgtggttaatgtctgacaagacaga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 acttggagacagcttttatgaatatttgcttaaggcgtggttaatgtctgacaagacaga 281
Query: 121 tctcgaagccaagaagatgtattttgatgctgttcaggtaacccaatatttaaatcgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tctcgaagccaagaagatgtattttgatgctgttcaggtaacccaatatttaaatcgtcc 221
Query: 181 ttgctagccagttctgcata 200
||||||| ||||||||||||
Sbjct: 220 ttgctagtcagttctgcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
