Query= MSMg01no103_m20.b1 MSMg01no103_m20.b1 CHROMAT_FILE:
MSMg01no103_m20.b1 PHD_FILE: MSMg01no103_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:50 2005
(292 letters)
>mm_chr10_31692674_31693365
Length = 692
Score = 557 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Minus
Query: 5 taattgactgcgacacggatatttcctggcttagtggcaagaagtcacatgttgaagtac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taattgactgcgacacggatatttcctggcttagtggcaagaagtcacatgttgaagtac 433
Query: 65 tagagagaatgttcaacttacaacacacaactttgtatggaaccattgttcaccttaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tagagagaatgttcaacttacaacacacaactttgtatggaaccattgttcaccttaaga 373
Query: 125 ttttgtgacttttgccgaaagctgcttttccagggtttctgctgtcacacatatggttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttttgtgacttttgccgaaagctgcttttccagggtttctgctgtcacacatatggttat 313
Query: 185 aaatttcaccagcattgtaatacagaggttccactaatgtgtgttaattatgaccagctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaatttcaccagcattgtaatacagaggttccactaatgtgtgttaattatgaccagctt 253
Query: 245 ggtttgctgtttgtctccaagttctttgagcataacccagtaccatgg 292
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggtttgctgtttgtctccaagttctttgagcataacccagtaccatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_m20.g1 MSMg01no103_m20.g1 CHROMAT_FILE:
MSMg01no103_m20.g1 PHD_FILE: MSMg01no103_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:50 2005
(295 letters)
>mm_chr10_31560417_31561112
Length = 696
Score = 464 bits (240), Expect = e-135
Identities = 282/296 (95%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 1 cttgacagagaatgtacaaacagacccagagtcaaagactggcc-agcggcatttgaata 59
|||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||
Sbjct: 201 cttgacagagaatgtacaaatagacccagagtcaaagactggccaagtggtatttgaata 260
Query: 60 agtgtttaacagaccttctaggaactacttggaaacagtctgaattggggagtttaccat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 agtgtttaacagaccttctaggaactacttggaaacagtctgaattggggagcttaccat 320
Query: 120 tttctactacagacactttgcctgtggctaatttgaagcaagttctatgatgtcaactga 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctactacaaacactttgcctgtggctaatttgaagcaagttctatgatgtcaactga 380
Query: 180 cactaacataatttagaaattggctctcatggggtggtttgagctagtttcactattaca 239
|| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattaataaaatttagaaattggctctcatggggtggtttgagctagtttcactattaca 440
Query: 240 acatgtctttgttcagaatatatgtggaagaattagctccatcacaaaagaaaagc 295
||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 441 acacgtccatgttcagaatatatgtggaagaagtagctccatcacaaaagacaagc 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 696
Length adjustment: 9
Effective length of query: 286
Effective length of database: 687
Effective search space: 196482
Effective search space used: 196482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
