MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-104D02
Chromosome	10 (Build37)
Map Location	91,438,570 - 91,438,815
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream gene	LOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Apaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1200009F10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67454 MGI:1914704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Slc25a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18674 MGI:1353498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 6 mRNAs

name	LOC100041769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC100041799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	LOC667203 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins pseudo : _no_value

name	LOC216229 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:216229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041814 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041814
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Nedd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17997 MGI:97293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm872 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380653 MGI:2685718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	4930485B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380654 MGI:1922208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 1 Protein

name	Apaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347470 GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptotic peptidase activating factor 1 transcript_id : NM_009684.2

name	Apaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347464 GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptotic peptidase activating factor 1 transcript_id : NM_001042558.1

name	1200009F10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121582656 GeneID:67454 MGI:1914704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200009F10 gene transcript_id : NM_027078.2

name	1200009F10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583480 GeneID:67454 MGI:1914704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200009F10 gene transcript_id : NM_026166.2

name	Slc25a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376554 GeneID:18674 MGI:1353498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 transcript_id : NM_133668.3

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949768 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080132.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949762 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080131.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949766 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080130.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949764 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080129.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949778 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080134.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949759 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_011605.2

name	LOC100041769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261009 GeneID:100041769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to protein translation factor sui1 homolog transcript_id : XM_001476977.1

name	LOC100041799 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261013 GeneID:100041799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : hypothetical protein LOC100041799 transcript_id : XM_001477025.1

name	Nedd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679031 GeneID:17997 MGI:97293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural precursor cell expressed, developmentally down-regulated gene 1 transcript_id : NM_008682.1

name	Gm872 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388536 GeneID:380653 MGI:2685718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : gene model 872, (NCBI) transcript_id : XM_354560.4

name	4930485B16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388537 GeneID:380654 MGI:1922208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 1 Protein product : RIKEN cDNA 4930485B16 gene transcript_id : XM_989129.1

name	Apaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347465 GeneID:11783 MGI:1306796
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0016505 - apoptotic protease activator activity [Evidence IPI]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007420 - brain development [Evidence IMP]; GO:0006919 - caspase activation [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0007275 - development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0002217 - physiological defense response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 note : forebrain overgrowth product : apoptotic protease activating factor 1 protein_id : NP_001036023.1

name	Apaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347471 GeneID:11783 MGI:1306796
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0016505 - apoptotic protease activator activity [Evidence IPI]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007420 - brain development [Evidence IMP]; GO:0006919 - caspase activation [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0007275 - development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0002217 - physiological defense response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 note : forebrain overgrowth product : apoptotic protease activating factor 1 protein_id : NP_033814.2

name	1200009F10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21630263 CCDS:CCDS24119.1 GeneID:67454 MGI:1914704
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0010165 - response to X-ray [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : IKK interacting protein isoform 2 protein_id : NP_081354.1

name	1200009F10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583481 GeneID:67454 MGI:1914704
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0010165 - response to X-ray [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : IKK interacting protein isoform 1 protein_id : NP_080442.2

name	Slc25a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526818 CCDS:CCDS24121.1 GeneID:18674 MGI:1353498
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : phosphate carrier, mitochondrial; solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 3 product : solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein_id : NP_598429.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949769 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform beta is encoded by transcript variant 2; lamina-associated polypeptide 2 product : thymopoietin isoform beta protein_id : NP_001073601.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949763 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform gamma is encoded by transcript variant 5; lamina-associated polypeptide 2 product : thymopoietin isoform gamma protein_id : NP_001073600.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949767 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform delta is encoded by transcript variant 4; lamina-associated polypeptide 2 product : thymopoietin isoform delta protein_id : NP_001073599.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949765 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform epsilon is encoded by transcript variant 3; lamina-associated polypeptide 2 product : thymopoietin isoform epsilon protein_id : NP_001073598.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949779 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform zeta is encoded by transcript variant 6; lamina-associated polypeptide 2 product : thymopoietin isoform zeta protein_id : NP_001073603.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949760 CCDS:CCDS24122.1 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform alpha is encoded by transcript variant 1; lamina-associated polypeptide 2 product : thymopoietin isoform alpha protein_id : NP_035735.2

name	LOC100041769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261010 GeneID:100041769
definition	codon_start : 1 product : similar to protein translation factor sui1 homolog protein_id : XP_001477027.1

name	LOC100041799 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261014 GeneID:100041799
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477075.1

name	Nedd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679032 CCDS:CCDS24123.1 GeneID:17997 MGI:97293
definition	codon_start : 1 exception : mismatches in translation product : neural precursor cell expressed, developmentally down-regulated gene 1 protein_id : NP_032708.1

name	Gm872 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027669 GeneID:380653 MGI:2685718
definition	codon_start : 1 product : hypothetical protein protein_id : XP_354560.3

name	4930485B16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388538 GeneID:380654 MGI:1922208
definition	codon_start : 1 product : hypothetical protein LOC380654 protein_id : XP_994223.1

name	LOC216229 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:216229
definition	number : 1 pseudo : _no_value

name	LOC100041814 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041814
definition	number : 1 pseudo : _no_value

name	LOC667203 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261115 GeneID:667203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins product : hypothetical LOC667203 pseudo : _no_value transcript_id : XR_034579.1

clone name	MSMg01-322I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-104D02.T7 (MSMg01no104_d02.b1)	MSMg01-104D02.TJ (MSMg01no104_d02.g1)
ACC	AG318866	AG318867
length	724	942
length of high quality (start - end)	246 (70 - 315)	---
definition	CHROMAT_FILE: MSMg01no104_d02.b1 PHD_FILE: MSMg01no104_d02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:03:22 2005	CHROMAT_FILE: MSMg01no104_d02.g1 PHD_FILE: MSMg01no104_d02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:03:22 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGAGCGCGGAA TTCTTCAATTTCCAAAGGAAAAAAAAAAAAAAAGGATGATTGCATGGGTC TCAGAGAGTCTCTATATCGCGAAAAACAGTTGTGAAGGTGTAAAGGTCAG AGAACAGTTAGCTCCAGGGCCTTTGCCTCAGTGACCCACATCACCTTTCA TAGGTACCACCCAAAGGAGAGATCAATTCCCATTCAAGCTTGGACACAGT CATGTCCAGATCACTTATAATTCTTTGCATGCTACTTGGCGGAGCTGCTA CAAATTTGAAGGATCTGTTACATTGTAGAGAATGGCCGTGTCTCCAAAGC TGGATTCCTGACTGAATTCCTAGAACCCACAACTGTTAACTTACGGGGAA AATGCTCTGAGTTCATGTCATTAACTTTTTTCAATACATTCTTCGTGAAA TCTCCAACAGGTCCTACGTTCCAGGATGATCCCTTTAAGAGATCTGCAGA GGACACCAGGCCCCCATAGACTGGTGCCCACCTACTTCTAGAATGGATAT CGTCAGAATGTCCTTATAACCCACGCCTTCCTGATTTCTATTACTGGGGC GAAAAGGGGGCTATTTCCCTTTTGGTCGCCCCTTTCCAGTTGGGTACCCT AGCTATCCCTTTAACTTCATGCCCCCTGGACTGCCCGACCAGGATCGAAC TATATCGGTCTTTTCCCCACCACT	NTTTTTTTTTTTTNNTTTTTNTTTNNTTTNATTTATATTTTTNNTTNNTT TNTNNNNNNNNTTTTTTTTNTTNTTTTATNNTNTTATATATTTTTTATAC CCTTTTNTTTANTTATTTANNTATTTATTATTTATTTTTTATTTTTTTTT ATTTTTTATTTTATTTCTNTTTCTTAATAANTAAANAACATAATATACTC TCCTATAATACTAAACTAAACAACNACCAAAAACTTTTTTATTGTAAATC TTATATCATTACTAATCCCCCACCTATCCACCCCATCCTCCCCTCCCTCC TTCTTCTTCCTTCTTTATACCCTCTCGGCACGGTGACACCGTGATCCCGT GCTGTTGAGTCTCATTACACACCAGTGAGCCACGCCGCCGCCTAGGTCGT CGTCGGGTGGGCGTGATCGTTGTTGTGTATTCTTCGCGCGCGGCGCGTGT TTCTTCGGTTTTTTTTTTGTGCGTCGGTTGTGCCACCGTTTGGGGCGGGC TTCGCCGAATGGCGCCGCGGCATGAGATCGCTGCGGCCGCCCTTTATTGT CGCGGTGATGTGTTGTGCGTCGTTGCGACTGTCGCGTTCTGCGGGCAGTA TGGACCGGCGTCTGGGGTCCGTAGCTCGGGGGTTATTAGTATTTTCGCCC GGGCGTAACCCCTTACGAGATCACCCGCAGATCTCATACGGTTAGGCGGG AGCATGGGACACATTATAAATTGAGACAGAGAGACGTGAACAACATCGGA TTAATAAAAGAAGAGCGACATAGGAATATCGAATAGCCAGAAAATATATA ATAAGCACCGGCCGTCGTCGTTCGCGTTTAACACGCGCCCGAGCTGATTT CACGCGCGTAGGCAGCCGCATAACGCCCGATAAAAAGCCACGCAGCACAA AGAGGCCGTCCATTGATCGTTAAGCTTCAGGCACGGCGACCG
quality values	Open. Hide. 6 6 6 6 6 6 6 8 7 7 7 13 11 18 19 20 17 17 12 12 11 23 23 37 17 15 14 10 10 6 6 6 6 6 6 7 7 7 9 10 10 10 10 10 13 24 30 23 14 14 24 22 24 25 16 13 10 10 7 12 14 16 11 11 18 13 13 15 11 19 19 31 35 26 28 28 30 28 28 48 48 48 57 57 50 43 40 40 36 36 33 30 28 28 31 31 37 39 43 39 32 32 20 20 20 28 28 43 32 32 23 23 32 34 30 34 19 14 11 11 11 25 27 47 33 31 30 30 30 30 36 39 39 47 47 43 42 42 39 39 39 43 43 33 37 32 33 32 32 36 36 42 43 54 48 48 46 43 43 43 39 43 43 43 37 43 39 44 42 30 30 39 44 57 54 54 54 47 42 35 35 35 37 42 42 47 44 46 43 43 44 43 43 57 57 57 57 44 37 43 50 44 44 43 28 28 43 41 43 42 42 44 44 37 37 42 42 43 57 41 41 41 41 41 41 57 39 42 42 43 43 46 40 37 30 30 42 42 43 43 43 46 46 47 47 47 47 37 36 30 25 23 28 37 30 30 37 37 42 48 48 48 48 48 48 43 43 43 43 39 43 43 43 47 47 47 46 46 46 48 48 41 41 41 41 41 22 15 6 6 8 17 21 31 31 31 37 28 28 28 25 25 25 33 33 47 39 43 39 47 39 29 29 15 15 14 13 14 12 12 11 15 23 30 23 23 14 14 14 19 19 23 10 10 6 6 8 10 22 32 30 30 28 34 23 23 23 28 23 28 32 37 39 37 37 28 28 28 34 34 36 36 36 39 39 42 35 32 39 31 32 23 22 19 21 12 14 12 18 15 15 30 26 32 32 29 33 30 31 29 24 17 11 11 11 11 12 19 26 24 28 28 28 28 31 23 25 19 19 12 13 10 10 10 13 15 14 17 15 14 13 10 12 8 8 8 8 13 15 9 8 8 8 13 10 12 13 15 23 18 24 16 11 12 10 12 12 12 10 10 15 19 19 24 14 14 14 15 15 15 18 15 13 18 18 23 12 10 10 10 8 8 8 16 13 14 12 10 10 10 12 8 10 12 12 12 11 10 11 9 9 9 9 9 17 22 12 11 11 11 11 11 10 10 10 16 10 8 10 8 8 8 8 8 8 8 10 9 11 10 10 10 10 10 10 12 9 9 10 9 10 10 10 10 10 10 9 12 10 10 10 10 10 8 6 8 8 8 8 6 8 8 8 10 10 10 10 16 14 11 11 11 8 15 6 6 8 8 6 6 7 7 10 8 11 11 11 12 11 11 12 11 18 10 8 6 6 6 8 8 8 8 8 8 8 8 6 7 6 6 8 8 10 19 18 22 17 22 12 12 13 24 15 20 24 30 28 19 15 12 10 10 10 10 12 13 13 16 17 18 24 10 10 10 10 10 8 8 8 8 8 8 8 6 6 6 6 8 10 10 10 10 13 10 10 10 10 16 25 10 12 6 6 8 6 6 8 8 15 13 18 13 15 10 13 11 13 13 10 9 9 9 10 10 13 8 8 8 8 8 10 9 9 12 9 9 9 8 8 8 10 10 10 11 8 8 6 6 6 8 6 9 8 8 8 8 8 8 8 8 8 8 8 8	Open. Hide. 0 3 7 7 9 9 9 9 9 9 7 7 3 0 0 3 7 7 7 3 0 3 17 3 0 0 3 27 3 0 3 10 11 14 19 23 19 14 14 17 21 3 0 0 3 3 0 0 3 17 3 0 3 0 0 0 0 0 0 0 0 3 7 7 9 9 7 8 3 0 3 3 0 3 21 19 9 9 3 0 0 3 0 3 17 19 19 17 7 7 8 15 15 24 21 21 9 9 9 10 21 27 33 21 21 3 0 3 17 8 3 0 3 8 10 11 21 9 3 0 0 3 7 7 9 9 7 8 8 8 8 13 8 10 10 26 22 28 24 22 19 16 9 9 9 9 15 8 6 6 6 8 21 17 14 11 17 24 27 23 22 9 8 10 10 10 18 3 0 3 7 6 6 6 13 10 9 10 10 3 0 3 13 11 3 0 3 6 6 8 8 10 8 8 6 6 6 6 6 7 8 8 15 8 8 8 9 10 10 9 10 21 9 10 8 8 8 8 10 8 8 8 8 3 0 3 12 8 12 9 11 10 9 9 9 10 10 13 13 10 10 10 10 15 13 6 6 6 6 8 8 11 9 9 10 11 11 10 10 10 15 10 8 8 8 8 8 10 7 7 7 6 8 8 8 6 6 7 10 7 7 6 6 6 8 8 6 6 6 6 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 8 8 6 6 8 10 13 11 12 10 8 8 8 8 8 8 8 8 9 10 12 11 11 10 10 10 10 8 8 8 10 8 8 8 6 8 6 6 6 6 8 6 11 8 8 8 8 8 8 8 8 6 6 8 6 10 10 10 10 11 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 6 6 6 8 8 8 9 10 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 10 11 12 11 11 11 10 9 9 9 9 10 10 8 8 8 10 8 8 9 9 11 9 9 9 6 6 6 6 8 8 11 11 9 9 9 8 10 8 8 6 6 8 8 8 6 6 8 8 8 8 10 10 10 10 8 8 8 8 8 8 8 11 10 8 8 8 11 10 10 8 8 8 8 6 6 8 8 8 10 10 10 12 8 8 8 8 10 8 12 9 9 10 9 9 8 8 8 8 8 6 8 8 8 8 8 8 6 6 8 8 11 13 10 10 10 10 10 12 12 12 9 8 8 8 8 8 12 15 14 13 10 10 8 8 6 6 8 8 8 8 8 8 8 9 11 11 11 11 9 8 8 6 6 8 8 8 6 8 8 6 6 8 8 8 8 8 8 9 13 18 15 12 10 10 10 10 10 10 10 8 10 10 10 8 11 9 9 8 8 8 10 8 8 8 8 10 9 9 9 14 10 10 9 6 6 6 6 8 8 8 6 6 6 6 8 8 10 7 7 8 8 10 10 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 13 12 12 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 11 13 11 10 12 8 8 8 6 6 6 6 6 8 8 8 8 8 8 8 7 6 6 8 8 9 9 9 10 10 10 10 10 10 12 12 11 11 11 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 13 9 9 9 9 8 8 8 8 6 6 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 6 7 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 9 9 9 9 10 15 15 15 10 9 9 9 9 10 8 8 8 8 7 6 8 8 6 6 6 6 8 8 8 6 6 8 8 8 6 6 8 8 10 7 7 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 16 10 10 9 9 9 8 8 8 8 8 8 8 8 10 12 9 10 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no104_d02.b1 MSMg01no104_d02.b1 CHROMAT_FILE:
MSMg01no104_d02.b1 PHD_FILE: MSMg01no104_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:22 2005
         (246 letters)



>mm_chr10_91438370_91439015
          Length = 646

 Score =  460 bits (238), Expect = e-134
 Identities = 244/246 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaaaaaaaaaaggatgattgcatgggtctcagagagtctctatatcgcgaaaaacag 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aaaaaaaaaaaaaaggatgattgcatgggtctcagagagtctctatatcgagaaaaacag 260

                                                                       
Query: 61  ttgtgaaggtgtaaaggtcagagaacagttagctccagggcctttgcctcagtgacccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgaaggtgtaaaggtcagagaacagttagctccagggcctttgcctcagtgacccac 320

                                                                       
Query: 121 atcacctttcataggtaccacccaaaggagagatcaattcccattcaagcttggacacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcacctttcataggtaccacccaaaggagagatcaattcccattcaagcttggacacag 380

                                                                       
Query: 181 tcatgtccagatcacttataattctttgcatgctacttggcggagctgctacaaatttga 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tcatgtccagatcacttataattctttgcatgctacttggtggagctgctacaaatttga 440

                 
Query: 241 aggatc 246
           ||||||
Sbjct: 441 aggatc 446


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space:   150969
Effective search space used:   150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information