Query= MSMg01no105_l17.b1 MSMg01no105_l17.b1 CHROMAT_FILE:
MSMg01no105_l17.b1 PHD_FILE: MSMg01no105_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:27 2005
(253 letters)
>mm_chr10_52976573_52977222
Length = 650
Score = 331 bits (171), Expect = 3e-95
Identities = 207/223 (92%), Gaps = 9/223 (4%)
Strand = Plus / Plus
Query: 1 tagaatactagtaaagttctgcgcaatagtaatagttcctcctgggaagatttgattatt 60
||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 201 tagaatactaggaaagttctgcgcaatagtaatagttcttcctgggaaggtctgattatt 260
Query: 61 tatag-tttttgttaatgatgcagaacacgtttgctcattcaggaagtatttcccaatac 119
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tatagttttttgttaatgatgcagaacacatttgctcattcaggaagtatttcccaatac 320
Query: 120 ttcatgtatatcaggcacagatgtaggcactgggagtccatctgagttcacattttctca 179
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ttcatgtatatcaggcacacatgtaggcactgggagtcc----gagttcacattttctca 376
Query: 180 ga----aatattgcctctctctctctttctctctctctctctc 218
|| |||||||||||||||||||| ||||||||||||||||
Sbjct: 377 gagagaaatattgcctctctctctctctctctctctctctctc 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 650
Length adjustment: 9
Effective length of query: 244
Effective length of database: 641
Effective search space: 156404
Effective search space used: 156404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no105_l17.g1 MSMg01no105_l17.g1 CHROMAT_FILE:
MSMg01no105_l17.g1 PHD_FILE: MSMg01no105_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:28 2005
(167 letters)
>mm_chr10_53114444_53115010
Length = 567
Score = 315 bits (163), Expect = 7e-91
Identities = 166/167 (99%)
Strand = Plus / Minus
Query: 1 gctgcaaagagtcaataactactggctctcatgtactcatctggtagtagcagaggcaac 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 315 gctgcaaagagtcaataactactggctctcatgtactcatctggaagtagcagaggcaac 256
Query: 61 ctacgttttgagctaggcaaaacaggctcttaattcaagctcaatccttcacctctaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctacgttttgagctaggcaaaacaggctcttaattcaagctcaatccttcacctctaatt 196
Query: 121 tcactgaacttgtttggtcctgtgtaaaatggggataatgacacagc 167
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tcactgaacttgtttggtcctgtgtaaaatggggataatgacacagc 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
