Query= MSMg01no106_g17.b1 MSMg01no106_g17.b1 CHROMAT_FILE:
MSMg01no106_g17.b1 PHD_FILE: MSMg01no106_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:49 2005
(236 letters)
>mm_chr10_21249446_21250083
Length = 638
Score = 418 bits (216), Expect = e-121
Identities = 229/234 (97%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 5 ttaagagctctttggtgagagtttttcctcaattgaata--atataaatgcatcacttat 62
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 438 ttaagagctctttggtgagagtttttcctcaattgaataatatataaatgcatcacttat 379
Query: 63 aagaccacttataagtaatctgtgtgctgtatcctggaagactttaaatagaatttttat 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagaccacttataagtaatctgtgtgctgtatcctggaagactttaaatagaatttttag 319
Query: 123 catgttttccaggaaagcaatagacaattaaagatgaacagtttctttgaagatctaggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catgttttccaggaaagcaatagacaattaaagatgaacagtttctttgaagatctaggg 259
Query: 183 aaagtgagtggttggaccgagctctcaggggtcagacaatggaggtgaccagga 236
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaagtgagtgattgggccgagctctcaggggtcagacaatggaggtgaccagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 638
Length adjustment: 9
Effective length of query: 227
Effective length of database: 629
Effective search space: 142783
Effective search space used: 142783
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no106_g17.g1 MSMg01no106_g17.g1 CHROMAT_FILE:
MSMg01no106_g17.g1 PHD_FILE: MSMg01no106_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:49 2005
(301 letters)
>mm_chr10_21121468_21122168
Length = 701
Score = 563 bits (291), Expect = e-165
Identities = 297/299 (99%)
Strand = Plus / Plus
Query: 1 tggtcacagagaaaggagataagagcctgggccagcaagttcgttattctctagtcccaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 tggtcacagagaaaggagataagagcctgggccagcaagtttgttattctctagtcccaa 260
Query: 61 aaggatgcagtggtgacttgttgtgcatgatctacaggaatgtaaacttggttttcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggatgcagtggtgacttgttgtgcatgatctacaggaatgtaaacttggttttcactg 320
Query: 121 tatttgtttgggggcagggagggaaagctttcgttgtgtcttcttaatatcttcagctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttgtttgggggcagggagggaaagctttcgttgtgtcttcttaatatcttcagctga 380
Query: 181 gcccggcaaatgaaacctagtgaggatagattaagaacaaaaggcattttgaaatttaat 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctggcaaatgaaacctagtgaggatagattaagaacaaaaggcattttgaaatttaat 440
Query: 241 tttatatgcatggggattctacaaaaagatagagagaagggaataggtgggggaggagg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatatgcatggggattctacaaaaagatagagagaagggaataggtgggggaggagg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
