Query= MSMg01no106_p22.b1 MSMg01no106_p22.b1 CHROMAT_FILE:
MSMg01no106_p22.b1 PHD_FILE: MSMg01no106_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:12 2005
(332 letters)
>mm_chr10_118329054_118329785
Length = 732
Score = 571 bits (295), Expect = e-167
Identities = 320/335 (95%), Gaps = 12/335 (3%)
Strand = Plus / Minus
Query: 1 gggctatacctgagaggacctgacctttgctttagttgttctaatggcctgtatgtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gggctatacctgagaggacctgacctttgctttagttgttctaatggcctgtatgtcctt 470
Query: 61 ctactaaaacacacacggggcaaagtatccaatggccaccctttcagtaaagtctacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctactaaaacacacacggggcaaagtatccaatggccaccctttcagtaaagtctacctg 410
Query: 121 actgccctatttaacattgcaacttgaacgttattatttctaagacacaagaataaacaa 180
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 409 actgccctatttaacattgcaacttggacattattctttctaagacacaagaataaacaa 350
Query: 181 tgcattgaaacttcctctctctcttcttggattctcatgcagactacatctattcagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgcattgaaacttcctctctctcttcttggattctcatgcagactacatctattcagtga 290
Query: 241 attgtgccccgttcacctaccagtgatttttcagtgg------atttttttagggggagt 294
||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 289 attgtgccccgttcacctaccagtgatttttcagtggacaccaa------tagggggagt 236
Query: 295 tcaatttaatgctgacactaattgaagtaactatg 329
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tcaatttaatgctgacactaattgaagtaactatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_p22.g1 MSMg01no106_p22.g1 CHROMAT_FILE:
MSMg01no106_p22.g1 PHD_FILE: MSMg01no106_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:12 2005
(462 letters)
>mm_chr10_118189599_118190460
Length = 862
Score = 611 bits (316), Expect = e-179
Identities = 406/462 (87%), Gaps = 43/462 (9%)
Strand = Plus / Plus
Query: 1 gaccatgaccattgttcacaggaaacatcagctgaaccgtcactttttgaaagcacagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaccatgaccattgttcacaggaaacatcagctgaaccgtcactttttgaaagcacagat 260
Query: 61 ctattgggtgggtttgtacgaatgtgtatgttgggcaaagttttcgattgaaaaacaaac 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ctattgggtgggtttgtacgaatgtgtatgttaggcaaagttttcgattgaa-------- 312
Query: 121 aaacaaacaaaaaaaaccaaacctgtcagccaaggctaaggaaactattttaggttaaaa 180
|||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 313 --------aaaaaaaaccaaacctgtca------gctaaggaaaccattttaggttaaaa 358
Query: 181 cggcaagggagggggacagggggacaggggcagggactgcaacggcctgtcatggagtcc 240
||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 359 cggcaaggg--------agggggacaggggcagggactgcaatggcctgtcatggagtcc 410
Query: 241 atgaaataactatagcttttcattggaaaggcttgtgtatcatctgagctgcggagaggg 300
||||||||||||||||||||||||||||||||||| | |||| |||||||| ||||||||
Sbjct: 411 atgaaataactatagcttttcattggaaaggcttggggatcaactgagctgtggagaggg 470
Query: 301 gtctcaggaaatagagctttcatcttcagagatcctaccacccagtgaacctgagatggc 360
|||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 471 gtctcaggaagtagagctttcatcttcagagatccaaccacacagtgaacctgagatggc 530
Query: 361 tttcaagccccaaatttctttaccaaaaagtctgtacaaaattatctttgtctttaaagt 420
||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 531 ttttaagccccaaatttctttaccaaaa-------------ttatctttgtctttaaagt 577
Query: 421 acagtattggggttcgaggaggaaagagcactggacccacaa 462
||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 578 acaatattggggtttgaggaggaaagagcactggacccacaa 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
