Query= MSMg01no107_b13.b1 MSMg01no107_b13.b1 CHROMAT_FILE:
MSMg01no107_b13.b1 PHD_FILE: MSMg01no107_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:28 2005
(330 letters)
>mm_chr10_24693693_24694421
Length = 729
Score = 561 bits (290), Expect = e-164
Identities = 320/332 (96%), Gaps = 5/332 (1%)
Strand = Plus / Minus
Query: 1 agatcagtttcggtgtgcaaggttttcaaaactgagttggaggtgtgaaaaaagtaaatt 60
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 529 agatcagttttggtgtgcaaagttttcaaaactgagttggaggtgtgaaaaaagtaaatt 470
Query: 61 gaaagtacttccctctttttctgctcagcaatcatttccgcagcacagcaatcagcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaaagtacttccctctttttctgctcagcaatcatttccgcagcacagcaatcagcaagc 410
Query: 121 gtttgatggtcagatagaaacgacccgtgtgtaagatcagccgggtgtggcaaaattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtttgatggtcagatagaaacgacccgtgtgtaagatcagccgggtgtggcaaaattgtt 350
Query: 181 ggaagtaaataatgagtccgtttcttaatttttctcagtgattactattctattcaactt 240
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggaagtagatattgagtccgtttcttaatttttctcagtgattactattctattcaactt 290
Query: 241 tccccctgaggttgatttttaaaatatcctcttccccagatttaaaa--tcagctatttt 298
||||||||||||| ||||||||||| |||||||||||||| |||| ||| |||||||
Sbjct: 289 tccccctgaggttcatttttaaaatttcctcttccccaga---aaaaaatcatctatttt 233
Query: 299 acctgggttggtaaaatgctagccacttcgag 330
||||||||||||||||||||||||||||||||
Sbjct: 232 acctgggttggtaaaatgctagccacttcgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_b13.g1 MSMg01no107_b13.g1 CHROMAT_FILE:
MSMg01no107_b13.g1 PHD_FILE: MSMg01no107_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:28 2005
(441 letters)
>mm_chr10_24534210_24535051
Length = 842
Score = 414 bits (214), Expect = e-120
Identities = 232/238 (97%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 205 aagataaagaggaagggaaagagaaagagaaaggagagacagaaaggtagaaagggcgaa 264
|||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 405 aagagaaagagaaagagaaagagaaagagaaaggagagacagaaaagtagaaagggcgaa 464
Query: 265 acaggtttctacaggaacctgagttcattagcaccagacttgtcttgaaaaggatgcaca 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 acaggtttctacaggaacctgagttcattagcaccagacttgtcttgaaaaggatgcaca 524
Query: 325 cacgaatcacataagaa-gtcaagaaacgcatgagcaaaggtaagcatacagacaaagac 383
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cacgaatcacataagaaagtcaagaaacgcatgagcaaaggtaagcatacagacaaagac 584
Query: 384 agacgattttaactctctgcaagtggtagcaaatcacatttacttccaacataaaaca 441
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 585 agacgattttaactctctgcaagtggtagcaaaacacatttacttccaacataaaaca 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
