Query= MSMg01no108_a16.b1 MSMg01no108_a16.b1 CHROMAT_FILE:
MSMg01no108_a16.b1 PHD_FILE: MSMg01no108_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:44 2005
(501 letters)
>mm_chr10_90447516_90448416
Length = 901
Score = 890 bits (460), Expect = 0.0
Identities = 478/484 (98%), Gaps = 3/484 (0%)
Strand = Plus / Plus
Query: 7 gaattcaaggctaccctcggtttacagagcaagatccaaaatagtcaggatgacacagcg 66
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaggctaccct-ggtctacagagcaagatccaaaatagtcaggatgacacagcg 264
Query: 67 agaccctgttgc-aaaaaag-aaaaaaaaatgtagattaagttaggggagggacatggta 124
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaccctgttgcaaaaaaagaaaaaaaaaatgtagattaagttaggggagggacatggta 324
Query: 125 cgggggctctggtaagagctggatgggagagagtggtagcagatttgagtaacacattgt 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgggggctctgataagagctggatgggagagagtggtagcagatttgagtaacacattgt 384
Query: 185 gtgtatgaaatactcaaagactttttaaaaacaagtgtaaggtgctttgggtgggctcac 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 gtgtatgaaatactcaaagactttttaaaaacaagtgtaaggtgctttgagtgggctcac 444
Query: 245 agattaggatatttagggttttgactttctggttggaataaggagatatcctaccacaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agattaggatatttagggttttgactttctggttggaataaggagatatcctaccacaac 504
Query: 305 ttttgtaaagcaaacttagctaagtgtaagtaagttataattattcccaaggctgtattc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttgtaaagcaaacttagctaagtgtaagtaagttataattattcccaaggctgtattc 564
Query: 365 tattttgactaaagtattattggtttatagtgcatgaagtattaatacagaaaagggttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tattttgactaaagtattattggtttatagtgcatgaagtattaatacagaaaagggttt 624
Query: 425 cataattcactaatatgaccaagcaaagacaatgattcttcttaagatatttatttatgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cataattcactaatatgaccaagcaaagacaatgattcttcttaagatatttatttatgg 684
Query: 485 gggg 488
||||
Sbjct: 685 gggg 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_a16.g1 MSMg01no108_a16.g1 CHROMAT_FILE:
MSMg01no108_a16.g1 PHD_FILE: MSMg01no108_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:45 2005
(602 letters)
>mm_chr10_90606326_90607327
Length = 1002
Score = 1131 bits (585), Expect = 0.0
Identities = 600/607 (98%), Gaps = 5/607 (0%)
Strand = Plus / Minus
Query: 1 ataggatccaagctgagcttaccaaagatccgactgaacggtgtgactagtagataacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 ataggatccaagctgagcttaccaaagatccgactgaacggtgtgactagtagataacat 871
Query: 61 catgggatgaagccaggtgttgagggctgtgcctttaatcaggaggaaaggcaggcctga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 870 catgggatgaagccaggtgttgagggctgtgcctttagtcaggaggaaaggcaggcctga 811
Query: 121 tccacatagcaagttctaggccaatgtagtgaaaccctgtttgaaaatagtcaaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tccacatagcaagttctaggccaatgtagtgaaaccctgtttgaaaatagtcaaaagaag 751
Query: 181 ccgggcgtggtggtgcactcctttaatcccagcactcaggaggcagagacaggcggatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ccgggcgtggtggtgcactcctttaatcccagcactcaggaggcagagacaggcggatct 691
Query: 241 ctgaggccagcctggtctacaaagtgagttccagggctatacagagaaaccctgtcttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctgaggccagcctggtctacaaagtgagttccagggctatacagagaaaccctgtcttga 631
Query: 301 aaaaccaaaagaa---aaaactatttttgtttttgtagtcaaatatattcaaaccaaaag 357
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaaaccaaaagaaaacaaaactatttttgtttttgtagtcaaatatattcaaaccaaaag 571
Query: 358 gttaagtggaaacacaggctgatgaatgagcacacaagaatacacactcgaagcgcaaca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gttaagtggaaacacaggctgatgaatgagcacacaagaatacacactcgaagcgcaaca 511
Query: 418 cttttagccccagaggcaggcagatctctgagttcaaggccagtctggcctgtagaggga 477
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 510 cttttagccccagaggcaggcagatctctgaattcaaggccagtctggcctgtagaggga 451
Query: 478 gttccaggacagccagggctacac--agaaacctatctccaaaaatcaaatactctaggc 535
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 450 gttccaggacagccagggctacacagagaaacctatctccaaaaatcaaatactctaggc 391
Query: 536 ccatattcagtctctactctccacacgcaacaaaaatttcagtgtaacatcacacgagag 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccatattcagtctctactctccacacgcaacaaaaatttcagtgtaacatcacacgagag 331
Query: 596 aaaggtg 602
|||||||
Sbjct: 330 aaaggtg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
