Query= MSMg01no108_a19.b1 MSMg01no108_a19.b1 CHROMAT_FILE:
MSMg01no108_a19.b1 PHD_FILE: MSMg01no108_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:45 2005
(647 letters)
>mm_chr10_54516030_54517076
Length = 1047
Score = 1141 bits (590), Expect = 0.0
Identities = 637/656 (97%), Gaps = 9/656 (1%)
Strand = Plus / Plus
Query: 1 atgctatggtgtgaaatttacctctgacttacaaggattgttcaacatttacaactcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctatggtgtgaaatttacctctgacttacaaggattgttcaacatttacaactcaat 260
Query: 61 aaatggtctgcacagtagcagaccaaggaccaaatgtcatgtgatttcagtagatagatt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aaatggtctgcacagtagcagaccaaggaccaaatgtcatgtgatttccgtagatagatt 320
Query: 121 aaaaacaaaacaaaagaaagaaatccaagcatttgacatgttgttattttgtagtataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaacaaaacaaaagaaagaaatccaagcatttgacatgttgttattttgtagtataaa 380
Query: 181 aggaagtgcttagggctgaggtaatagattagttgggaaaatacttaaactgcacgaaaa 240
||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 aggaagtacttggggctgaggtaatagattagttgggaaaatacttaaactgcatgaaaa 440
Query: 241 agaaacaaaaaccaaaacttaagttctattcctagacctagaatttgaggttttgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaacaaaaaccaaaacttaagttctattcctagacctagaatttgaggttttgttgtt 500
Query: 301 gttgctggggtttttgtttgtttgtttgtt-g--gttttttttttt----aagtcaggca 353
|||||||||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct: 501 gttgctggggtttttgtttgtttgtttgtttgctgtttttttttttttttaagtcaggca 560
Query: 354 tgctggtttacacttgtaatctcaatactgggagatacagataggcgggtttctggggct 413
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 tgctggtttacacttgtaatctcaatactgggagatacagataggcaggtttctggggct 620
Query: 414 ccttagttagacagcctaccctccttggtgagtgctaggctggtgagagacccagttcag 473
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttagtcagacagcctaccctccttggtgagtgctaggctggtgagagacccagttcag 680
Query: 474 aaaaaaagaaaaaaaataaa--gaaggttgatgtctgaagaatgacaactgaggtcatca 531
|||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaaaagaaaaaaaaaaaaaagaaggttgatgtctgaagaatgacaactgaggtcatca 740
Query: 532 tcttgccttagtatatataaacacacaggtattcacaaacctatagacatgcacacatac 591
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 tcttgccttaatatatataaacacacaggtatacacaaacctatagacatgcacacatac 800
Query: 592 atggatacacactactgatgaagttaatagaaaaccaacaaacagaacttggtcgc 647
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 801 atggatacacactactgatgaagttaatacaaaaccaacaaacagaacttggtcgc 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_a19.g1 MSMg01no108_a19.g1 CHROMAT_FILE:
MSMg01no108_a19.g1 PHD_FILE: MSMg01no108_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:45 2005
(643 letters)
>mm_chr10_54593709_54594751
Length = 1043
Score = 588 bits (304), Expect = e-172
Identities = 357/382 (93%), Gaps = 12/382 (3%)
Strand = Plus / Minus
Query: 274 tgtgtgtgtgtgtgtgtatagcttttaggaagtactga------------gcacttgaga 321
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 893 tgtgtgtgtgtgtgtgtatagcttttaggaagtactgatttgtgatacatgcacttgaga 834
Query: 322 tgtatggttagattgtattgatgccttgcttgctgctttaataataagggtttccatacc 381
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 833 tgtatggttagactgtattgatgccttgcttgctgctttaataacaagggtttccagacc 774
Query: 382 agcttgaacacacccagaatgtgttgctaaaatactatagatggtgtctcagaacacagt 441
| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 773 aacttgaacacacccagaatgtgttgctaaaatactatagatggtgtctcagaaaatagt 714
Query: 442 ctgagtcaaacataatgacatctaggttataaccagagaattcactagtaaaccttatat 501
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 713 ctgagtcaaacataatgacatctagtttataaccagagaattcactagtaaaccttatat 654
Query: 502 ggtaaaccttatatgtttgagagttccagtataactaagagtttatagtgaaacccagta 561
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 653 ggtaaaccttatatgtttgagagttccagtataactcagagtttatagtgaaacccagta 594
Query: 562 aacataaaaataaaaaacaaacacctagaaaaattgttgactacaagtataaaaactgct 621
||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 593 aacataaaaataagaaacaaacacctagagaagttgttgactacaagtgtaaaaactgct 534
Query: 622 taaacaaatacttacaggcaaa 643
|| |||||||||||||||||||
Sbjct: 533 tatacaaatacttacaggcaaa 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
