Query= MSMg01no108_g02.b1 MSMg01no108_g02.b1 CHROMAT_FILE:
MSMg01no108_g02.b1 PHD_FILE: MSMg01no108_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:13 2005
(650 letters)
>mm_chr10_82622263_82623312
Length = 1050
Score = 1183 bits (612), Expect = 0.0
Identities = 641/654 (98%), Gaps = 8/654 (1%)
Strand = Plus / Minus
Query: 4 ggaattcatttgttcga-atataccttaaacacatgggctgaaagtaattttagacactt 62
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ggaattcatttgtttgacatataccttaaacacatgggctgaaagtaattttagacactt 725
Query: 63 aaaaaaaaaaccaaaatgatttcatgtgcaatgcacagctttttagcatgagatttttgt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 -aaaaaaaaaccaaaatgatttcatgtgcaatgcacagctttttagcatgagatttttgt 666
Query: 123 gcctatatttggggtctcagagtatctaatctgtaccctccccattttacagatgaggac 182
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 665 gcctatatttggggtctcagagtgtctaatctgtaccctccccattttacagatgaggac 606
Query: 183 attgaggtaagttgtcacctattcaagtgaagaattgccttttgaccaccattctacccc 242
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 605 attgaggtaagttgtcacctattcaagtgaaaaattgccttttgaccaccattctacccc 546
Query: 243 ataaacaagtcagttttacaataataagcaaatacttcatagattaagtttcttgtaaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ataaacaagtcagttttacaataataagcaaatacttcatagattaagtttcttgtaaac 486
Query: 303 aaaaggtgggtgtttctgtgttcttggacttcacgatgggtttctgtgattttatttttg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaaaggtgggtgtttctgtgttcttggacttcacgatgggtttctgtgattttatttttg 426
Query: 363 tggttcttatctggtccatcatcat------tatcaccaccatcacagtcataaacatca 416
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 425 tggttcttatctggtccatcatcatcatcattatcaccaccatcacaatcataaacatca 366
Query: 417 tattattattaagtttgtttttatcattaatttaattaaaataaattaatttaacttatt 476
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tattattattacgtttgtttttatcattaatttaattaaaataaattaatttaacttatt 306
Query: 477 attattaataattagtttagtgtgtgtgtatgtttgtttagaggtcagaggacagcctca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attattaataattagtttagtgtgtgtgtatgtttgtttagaggtcagaggacagcctca 246
Query: 537 gatgaagtttcttctcaggcactgtctaccttatttttttgaaacaggttctctcacttg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gatgaagtttcttctcaggcactgtctaccttatttttttgaaacaggttctctcacttg 186
Query: 597 tagagagcctttctgatgaggctaggctgcctggctagcaaatgctagggacct 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tagagagcctttctgatgaggctaggctgcctggctagcaaatgctagggacct 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_g02.g1 MSMg01no108_g02.g1 CHROMAT_FILE:
MSMg01no108_g02.g1 PHD_FILE: MSMg01no108_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:13 2005
(589 letters)
>mm_chr10_82490593_82491581
Length = 989
Score = 1108 bits (573), Expect = 0.0
Identities = 585/589 (99%)
Strand = Plus / Plus
Query: 1 aatggcgcccgtcaaactttattcctttctcctggtccggaagtgttgtttgtgcagcct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 aatggcgcccgtcaaactttattcctttctcctggtccggaagtgttgtttgtgcagctt 260
Query: 61 gtcttccaaaatcaatgtgagagagacagcagctgagagcctctccttcgaagacaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttccaaaatcaatgtgagagagacagcagctgagagcctctccttcgaagacaaagc 320
Query: 121 cttccctttgtcaggctgagatgtgtaaagttcttggatttttttccctcttcccttttt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttccctttgtcaggccgagatgtgtaaagttcttggatttttttccctcttcccttttt 380
Query: 181 aaaagagagagtcaacagtccattatgtgactgtaaagtgttttggttgcttgtgatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagagagagtcaacagtccattatgtgactgtaaagtgttttggttgcttgtgatttg 440
Query: 241 aggaatgtactcatgagagtcataattttatagatttaggaaaatttatatgtgctttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaatgtactcatgagagtcataattttatagatttaggaaaatttatatgtgctttca 500
Query: 301 cgtgggtgggtaggtttgaggtaggcctttaaacacatatatatttcctttttaaaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtgggtgggtaggtttgaggtaggcctttaaacacatatatatttcctttttaaaaaac 560
Query: 361 cctttatttgaattgaccaaacacagcatcatgtaggtgaattttctagaccttctgtga 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctttatttgaaatgaccaaacacagcatcatgtaggtgaattttctagaccttctgtga 620
Query: 421 agaacaacacagaacaaaagaagccaagtactgagcctggtgttggggtgtcgagacagc 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaacatcacagaacaaaagaagccaagtactgagcctggtgttggggtgtcgagacagc 680
Query: 481 tgctgcttgagtctgctccgctcctaggaagtttgtagcctacattctgttttctctgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgctgcttgagtctgctccgctcctaggaagtttgtagcctacattctgttttctctgta 740
Query: 541 aaagcaaattttcgtctgtcatttttgataataacatctcttcttcttc 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagcaaattttcgtctgtcatttttgataataacatctcttcttcttc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
