Query= MSMg01no108_i21.b1 MSMg01no108_i21.b1 CHROMAT_FILE:
MSMg01no108_i21.b1 PHD_FILE: MSMg01no108_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:27 2005
(486 letters)
>mm_chr10_114126595_114127482
Length = 888
Score = 878 bits (454), Expect = 0.0
Identities = 479/488 (98%), Gaps = 2/488 (0%)
Strand = Plus / Minus
Query: 1 agttacttatacactgtattgcacaatggtaacaagttggggcatcttgaactaaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agttacttatacactgtattgcacaatggtaacaagttggggcatcttgaactaaaaact 629
Query: 61 tcaaatccaatttaataaccttttcaaaaattgtcttactgacttgccggtgttgttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcaaatccaatttaataaccttttcaaaaattgtcttactgacttgccggtgttgttaca 569
Query: 121 tattctatttgcttgatatcccttccttcctaatttcttactgagtcttaagagtttcag 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 568 tattctatttgcttgatatcccttccttcctaatttattactgagtcttaagagtttcag 509
Query: 181 acattcacaaccatggaatttcccctcatcctattttgtcaaggcctccaacacaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acattcacaaccatggaatttcccctcatcctattttgtcaaggcctccaacacaatttt 449
Query: 241 taacttatctggtcaga--caattggctcttaggttagaaaataactttccattgattac 298
| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgacttatctgggcagagacaattggctcttaggttagaaaataactttccattgattac 389
Query: 299 agatttgactattgcataagccttctgccttatcctctactagcccaccctaatgaccaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 388 agatttgactattgcataagccttctgccttatcctctactagcccaccctgatgaccaa 329
Query: 359 gagtaacacacattggtctgaaagagatgggtgtctcattctcttctctcacctgctcga 418
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 328 gagtaacacacattggtctgaaagagatgggtgtcttattctcttctctcacctgctcga 269
Query: 419 attcatcattttagcacttcttcagttcttcccataattcagttttccctctttcttgac 478
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 268 agtcatcattttagcacttcttcagttcttcccataattcagctttccctctttcttgac 209
Query: 479 tctttatc 486
||||||||
Sbjct: 208 tctttatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 888
Length adjustment: 10
Effective length of query: 476
Effective length of database: 878
Effective search space: 417928
Effective search space used: 417928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_i21.g1 MSMg01no108_i21.g1 CHROMAT_FILE:
MSMg01no108_i21.g1 PHD_FILE: MSMg01no108_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:27 2005
(210 letters)
>mm_chr10_113971780_113972389
Length = 610
Score = 375 bits (194), Expect = e-109
Identities = 206/210 (98%), Gaps = 2/210 (0%)
Strand = Plus / Plus
Query: 2 aaaaaattgaaaggattgattat-cacatcaaaaattaaattacattcgatatcatagaa 60
||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||
Sbjct: 202 aaaaaattgaaaggattgattatcca-atcaaaaattaaattacatttgatatcgtagaa 260
Query: 61 aaactaaacagtaacaaatataccaatgatttgatctttaaagacatcaatatacagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactaaacagtaacaaatataccaatgatttgatctttaaagacatcaatatacagaat 320
Query: 121 agaaaagtttaaaaatattaggagaagacatgagagaatagctttataatttggtcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaagtttaaaaatattaggagaagacatgagagaatagctttataatttggtcataa 380
Query: 181 caaatgaccttaaaaactaaagtataatgt 210
||||||||||||||||||||||||||||||
Sbjct: 381 caaatgaccttaaaaactaaagtataatgt 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
