Query= MSMg01no108_j19.b1 MSMg01no108_j19.b1 CHROMAT_FILE:
MSMg01no108_j19.b1 PHD_FILE: MSMg01no108_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:32 2005
(432 letters)
>mm_chr10_127146294_127147124
Length = 831
Score = 766 bits (396), Expect = 0.0
Identities = 420/428 (98%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 1 gatttttaactccatcctcagggttctaaacaatgaaaacaactgaacaaatcctctctc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gatttttatctccatcctcagggttctaaacaatgaaaacaactgaacaaatcctctctc 568
Query: 61 ctgctctggcaagaagctgagggaagaaaaaaccatacgtgtgtgcccccagcctcacca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgctctggcaagaagctgagggaagaaaaaaccatacgtgtgtgcccccagcctcaccg 508
Query: 121 tcccctgctgtgtcaacatagcagtctgcttcccaaccctaacgctgccccccacccacc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 507 tcccctgctgtgtcaacatagcagtctgcttcccaaccctaacactgccccccacccacc 448
Query: 181 cagaaggttttcgccaatgctggctgctgagctaaatggctttctcgtgttcccctgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagaaggttttcgccaatgctggctgctgagctaaatggctttctcgtgttcccctgtga 388
Query: 241 taagtgataatgtcccggctcgcgtcagaagagctaggttttgatttttttttcttcctt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 387 taagtgagaatgtcccggctcgcgtcagaagagctaggttttgattttttttt-ttcctt 329
Query: 301 tcttcccccaaaatgaatgatttgtgcgttggaattgcttctcattgacatgttacctgg 360
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 328 tcttccccaaaaatgaatgatttgtgtgttggaattgcttctcattgacatgttacctgg 269
Query: 361 ctggaaaacaaggtttttattttctctttcataaatgaaccaaggaaatgtcccaagctg 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 268 ctggaaaacaaggtttttattttcactttcataaatgaaccaaggaaatgtcccaagctg 209
Query: 421 tttactaa 428
||||||||
Sbjct: 208 tttactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 831
Length adjustment: 9
Effective length of query: 423
Effective length of database: 822
Effective search space: 347706
Effective search space used: 347706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_j19.g1 MSMg01no108_j19.g1 CHROMAT_FILE:
MSMg01no108_j19.g1 PHD_FILE: MSMg01no108_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:32 2005
(411 letters)
>mm_chr10_126981831_126982641
Length = 811
Score = 748 bits (387), Expect = 0.0
Identities = 402/407 (98%)
Strand = Plus / Plus
Query: 1 tatcttgtggtctctggttagcatgtacgtctgctacagactctgataagtgctgaagcg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tatcttgtggtctctggttagcatgtaggtctgctacagactctgataagtgctgaagcg 260
Query: 61 gtacagagatgtggaggatatgtgcaaggcatgagaaatgtatgtatacatgggagtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacagagatgtggaggatatgtgcaaggcatgagaaatgtatgtatacatgggagtgtg 320
Query: 121 tatatacataccatgtacatgtacggtgtgaggacatatgaaaggtgcagtgctgtgtca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatgcataccatgtacatgtacggtgtgaggacatatgaaaggtgcagtgctgtgtca 380
Query: 181 gggcatggagggaacatgcaggtgggtgcatgtgactgtgagtcggactatactctcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcatggagggaacatgcaggtgggtgcatgtgactgtgagtcggactatactctcaat 440
Query: 241 ctatgagaggggaggggacactgtgtgccacacaggagtgttgctctcatagaacttccc 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaggagaggggaggggacactgtgtgccacacaggagtgttgctctcatagaacttccc 500
Query: 301 cagaaagccaggcggtaccttctacctttcctgtgctttgctttgctcgggatggtatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 cagaaagccaggcggtaccttctacctttcctgtgctttgctttgctcgggatggcatcc 560
Query: 361 cggtgtaccttgagtctggtcatccaagtctgagcaacgaagtgcca 407
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 cggtgtaccttgagtctgggcatccaagtctgagcaacgaagtgcca 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
