Query= MSMg01no110_h04.b1 MSMg01no110_h04.b1 CHROMAT_FILE:
MSMg01no110_h04.b1 PHD_FILE: MSMg01no110_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:02 2005
(217 letters)
>mm_chr10_27787960_27788582
Length = 623
Score = 344 bits (178), Expect = 2e-99
Identities = 208/218 (95%), Gaps = 6/218 (2%)
Strand = Plus / Minus
Query: 5 gaattcctttggtttgaatgcatgtgttatcctaggatgttctttaatttagaaaaacta 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 422 gaattcctttggtttgaatgcatgtgttatcctaagatgttctttaatttagaaaaacta 363
Query: 65 aaaaagaaagtattcaaactagttaagtacatcacacattcagtgatatattgtgtgggg 124
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 aaagagaaagtattcaaactagttaagtacatcacacattcagtgatacattgtgtgggg 303
Query: 125 ttaagagactccatgcaaagacgcaggctgatgagaatg-acagagctga-atattttct 182
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct: 302 ttaagagactccatgcaaagacgcaggctgatgagaatgaacagagctgagatattctct 243
Query: 183 ag-ga-tagtctcctt-cttcct-ccacttacttctga 216
|| || |||||||||| |||||| ||||||||||||||
Sbjct: 242 agtgattagtctccttccttcctcccacttacttctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 623
Length adjustment: 9
Effective length of query: 208
Effective length of database: 614
Effective search space: 127712
Effective search space used: 127712
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no110_h04.g1 MSMg01no110_h04.g1 CHROMAT_FILE:
MSMg01no110_h04.g1 PHD_FILE: MSMg01no110_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:02 2005
(274 letters)
>mm_chr10_27707401_27708074
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 cagaacagctgagattacacagagaacaaacagacaaacaaagcaaaacctaaccagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaacagctgagattacacagagaacaaacagacaaacaaagcaaaacctaaccagtac 260
Query: 61 aatgaggcaggttagaaaatatcttctggtcaatttttagtcaaaaaggtaggggaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaggcaggttagaaaatatcttctggtcaatttttagtcaaaaaggtaggggaaaat 320
Query: 121 tagagttaatattttcagagtttgtatctggccttagacaaaaggtggtagctatttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagttaatattttcagagtttgtatctggccttagacaaaaggtggtagctatttcta 380
Query: 181 tgatccactgctgggaagggaaattctaatttctatggctttaccccattcagaggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatccactgctgggaagggaaattctaatttctatggctttaccccattcagaggaaaa 440
Query: 241 ggggtgagaaacaggacaggagaaggtgagacaa 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggtgagaaacaggacaggagaaggtgagacaa 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
