Query= MSMg01no111_h17.b1 MSMg01no111_h17.b1 CHROMAT_FILE:
MSMg01no111_h17.b1 PHD_FILE: MSMg01no111_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:52 2005
(513 letters)
>mm_chr10_27113583_27114493
Length = 911
Score = 895 bits (463), Expect = 0.0
Identities = 500/513 (97%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 1 tagtgcttttattattaaatgttctaccctgtgtgctgcctataacttcaatcctcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtgcttttattattaaatgttctaccctgtgtgctgcctataacttcaatcctcatta 260
Query: 61 gttaattcttgtggttataatggtattacttatggtttctatttttgcaggtcagaaaag 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gttaattcttgtggttataatggtattatttatggtttctatttttgcaggtcagaaaag 320
Query: 121 gttacaagatattaaagaatttagccaagaacacaaagttgaaaaaattggtagatgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttacaagatattaaagaatttagccaagaacacaaagttgaaaaaattggtagatgaga 380
Query: 181 ctcaattctaagagctggtgagctattataggccatgatgaacaagggcaacatggtgaa 240
|||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 381 ctcaattctaagagctggtgagctggtataggccataatgaacaagggaaacatggtgaa 440
Query: 241 tgcagtgggcgcgggccaactcctccacagtccctgtccagcaacctgagaatggcttgg 300
|||||||| | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagtgg--gtggaccaactcctccacagtccctgtccagcaacctgagaatggcttgg 498
Query: 301 tttcactaatgcgcaagtcttaacattgtttaagcattatagctaaggtgctaaacttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttcactaatgcgcaagtcttaacattgtttaagcattatagctaaggtgctaaacttta 558
Query: 361 tgtgtcatctttaattatgttgtgctgtctaggatcagagggcctcacatagacttaaat 420
||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtgtcatctttatttatgttgcgttgtctaggatcagagggcctcacatagacttaaat 618
Query: 421 agctggaaaatacagaaaaccactaacccttcctcagtcaccttgcactgatatttattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agctggaaaatacagaaaaccactaacccttcctcagtcaccttgcactgatatttattt 678
Query: 481 tgatcacagtatggtgaacattgcctttgtaaa 513
||||||||||||| |||||||||||||||||||
Sbjct: 679 tgatcacagtatgatgaacattgcctttgtaaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 911
Length adjustment: 10
Effective length of query: 503
Effective length of database: 901
Effective search space: 453203
Effective search space used: 453203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_h17.g1 MSMg01no111_h17.g1 CHROMAT_FILE:
MSMg01no111_h17.g1 PHD_FILE: MSMg01no111_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:52 2005
(485 letters)
>mm_chr10_27233297_27234181
Length = 885
Score = 870 bits (450), Expect = 0.0
Identities = 477/486 (98%), Gaps = 2/486 (0%)
Strand = Plus / Minus
Query: 1 gatgcttaaaataaagagaagatgttatggttatatcggaagctagcttctcttctgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatgcttaaaataaagagaagatgttatggttatatcggaagctagcttctcttctgttg 626
Query: 61 gatccacacagcaattctttaattacattttaaaagtggcttaaaatggtctctgtgttc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatccacacagcaattctttaatcacattttaaaagtggcttaaaatggtctctgtgttc 566
Query: 121 ttctaaggtctcacaatggcatctgtagttcctaacatacatataaatcactcattctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttctaaggtctcacaatggcatctgtagttcctaacatacatataaatcactcattctca 506
Query: 181 agtcagcaagtcacatacagaacgtgaaagccaataagtgatgcagagtcagggactgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtcagcaagtcacatacagaacgtgaaagccaataagtgatgcagagtcagggactgca 446
Query: 241 aaggggataaatctgaaggggagtga-gttttcatcttttttgagacatggaagtcattg 299
|||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct: 445 aaggggataaatctgaaggggagt-atgttttcatctcttttgagacatggaagtcattg 387
Query: 300 atgcttctcacaggtgatcagcttttaaaatctcaattattgagtagcatgcacatggca 359
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 386 atgcttctcacaggtgatcagcttttaaaatctcagttattgagttgcatgcacatggca 327
Query: 360 tgcatgtggaagggttaagtatcagaaggtaccttggtggttctaggccaaggtgtgctg 419
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct: 326 tgcatgtggaagggttaagtaacagaaggcaccttggtggttctaggccaaggtgtgatg 267
Query: 420 caaatatcatgtcacacaacaaatctaagacaagagttttattggggggagtggggaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaatatcatgtcacacaacaaatctaagacaagagttttattggggggagtggggaatg 207
Query: 480 gaaggc 485
||||||
Sbjct: 206 gaaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
