Query= MSMg01no111_i09.b1 MSMg01no111_i09.b1 CHROMAT_FILE:
MSMg01no111_i09.b1 PHD_FILE: MSMg01no111_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:58 2005
(636 letters)
>mm_chr10_106072222_106073259
Length = 1038
Score = 1149 bits (594), Expect = 0.0
Identities = 629/644 (97%), Gaps = 8/644 (1%)
Strand = Plus / Plus
Query: 1 tggtgtctacatatttctgttcagaggatcccgtagacagtgggatcccagtacacagtt 60
||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct: 195 tggtgtctacatatttctgttcagaggatcctggagtcagtgggatcccagtacacagtt 254
Query: 61 tataaattatatttactgaggcaaaactgaagctctagggtatagatccttgtaatgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tataaattatatttactgaggcaaaactgaagctctagggtatagatccttgtaatgctc 314
Query: 121 atggatggtcaaacatttaagacaaatgatactggcaagctgttgcagtatttatataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atggatggtcaaacatttaagacaaatgatactggcaagctgttgcagtatttatataca 374
Query: 181 taattgtagaaaactttataatactcaaatgtttgtgtatgtatatgtatatatata--t 238
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 375 taattgtagaaaactttataatactcaaatgtttgagtatgtatatgtatatatatatgt 434
Query: 239 ac----atatatacatacatgtatgtatatatatcatctgtagctatacatatgagaatc 294
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acacatatatatacatatatgtatgtatatatatcatctgtagctatacatatgagaatc 494
Query: 295 aacttaattctttttacttttatacacaggcacacacacagacatacaagcatgatttca 354
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 495 aacttaattctttttacttttatacacaggcacacacacagacatgcaagcatgatttca 554
Query: 355 ttatgtcccttccaactctgtctttctacatgaaaccacctatgtacccttctgaaactt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttatgtcccttccaactctgtctttctacatgaaaccacctatgtacccttctgaaactt 614
Query: 415 ctagatgtgctaggcacaaaacattttaatcattccaaaacacccatgtccaatatgtat 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctagatgtgctaggcacaaaacattttaatcattccaaaacacccatgtccaatatgtac 674
Query: 475 cttcccatttcctagacttataacaacttttacccagtaactgacctttcttctgccttt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cttcccatttcctagacttataacaacttttacccagtaactgacctttcttctgccttt 734
Query: 535 at--gtatttcattcatcataattctatgtactggtttattgaaaacaaaccagaaaaca 592
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 atatgtatttcattcatcataattctatgtactggtttattgaaaacaaaccagaaaaca 794
Query: 593 ttatgcagttatgaaaacaaaatgtctttcacagactccctaaa 636
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttatgcagttatgaaaacaaaatgtctttcacagactccctaaa 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1038
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1028
Effective search space: 643528
Effective search space used: 643528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_i09.g1 MSMg01no111_i09.g1 CHROMAT_FILE:
MSMg01no111_i09.g1 PHD_FILE: MSMg01no111_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:58 2005
(615 letters)
>mm_chr10_106202903_106203916
Length = 1014
Score = 944 bits (488), Expect = 0.0
Identities = 507/514 (98%), Gaps = 3/514 (0%)
Strand = Plus / Minus
Query: 104 gactgtttctctcatgtatgttttctgacagcttctaaggttgaaaggatgcatggtggc 163
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gactgtttccctcatgtatgttttctgacagcttctaaggttgaaaggatgcatggtggc 955
Query: 164 acatgacggcagacctccaacacttggaagagtcaggaggaaggttatagttcaaaggcc 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 acatgacggcagacctccaacacttggaagagtcaggaggaaggttatagttcaaaggcc 895
Query: 224 agactgagatgtgtagaagg--ttatatatataggctagcttgctttacttagtgagacc 281
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 894 agactgagatgtgtagaaggttttatatatataggctagcttgctttacttagtgagacc 835
Query: 282 ctgtctcaaatgaagcaaaaatcaaacgaaattaaaatgatacagtaaaaggcacaaatc 341
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 834 ctgtctcaaatgaagcaaaaatcaaacgaaattaaaatgaaacagtaaaaggcacaaatc 775
Query: 342 tttatatctttacactgatgcattattatctctggcttacatttatcaaagacaagctac 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tttatatctttacactgatgcattattatctctggcttacatttatcaaagacaagctac 715
Query: 402 ccagggtaaaaatcaagtcatttttcttaatgacgattgtagtttaatttgcctaaaaag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ccagggtaaaaatcaagtcatttttcttaatgacgattgtagtttaatttgcctaaaaag 655
Query: 462 ctaataaaccttagatctgaatacaattcatcacaagtttttgatttcttatgaattaat 521
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 654 ctaataaaccttagatctgaatacaattcatcacaagttttcgatttcttatgaattaat 595
Query: 522 gtattttctgtaaagacattatagaatttgtctctataaatatgaattttaatgctatag 581
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 594 gtattttctgtaaagatattatagaatt-gtctctataaatatgaattttaatgctatag 536
Query: 582 ttatattcctaaaactgaatctgttatgtaactg 615
||||||||||||||||||||||||||||||||||
Sbjct: 535 ttatattcctaaaactgaatctgttatgtaactg 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1014
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1004
Effective search space: 607420
Effective search space used: 607420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
