MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-111L02
Chromosome	10 (Build37)
Map Location	90,696,665 - 90,697,377
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Anks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream gene	LOC100041799, LOC667203
Link	Open Mouse BAC browser

Click to get alignment info.

name	Anks1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77531 MGI:1924781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 89 ESTs, 2 Proteins

name	Apaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1200009F10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67454 MGI:1914704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Slc25a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18674 MGI:1353498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 6 mRNAs

name	LOC100041769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC100041799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	LOC667203 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins pseudo : _no_value

name	Anks1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261107 GeneID:77531 MGI:1924781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 89 ESTs, 2 Proteins product : ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant 2 transcript_id : XM_001003400.2

name	Apaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347470 GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptotic peptidase activating factor 1 transcript_id : NM_009684.2

name	Apaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347464 GeneID:11783 MGI:1306796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptotic peptidase activating factor 1 transcript_id : NM_001042558.1

name	1200009F10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121582656 GeneID:67454 MGI:1914704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200009F10 gene transcript_id : NM_027078.2

name	1200009F10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583480 GeneID:67454 MGI:1914704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200009F10 gene transcript_id : NM_026166.2

name	Slc25a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376554 GeneID:18674 MGI:1353498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 transcript_id : NM_133668.3

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949768 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080132.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949762 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080131.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949766 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080130.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949764 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080129.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949778 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_001080134.1

name	Tmpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949759 GeneID:21917 MGI:106920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymopoietin transcript_id : NM_011605.2

name	LOC100041769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261009 GeneID:100041769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to protein translation factor sui1 homolog transcript_id : XM_001476977.1

name	LOC100041799 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261013 GeneID:100041799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : hypothetical protein LOC100041799 transcript_id : XM_001477025.1

name	Anks1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388543 GeneID:77531 MGI:1924781
definition	codon_start : 1 product : ankyrin repeat and sterile alpha motif domain containing 1B isoform 2 protein_id : XP_001003400.1

name	Apaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347465 GeneID:11783 MGI:1306796
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0016505 - apoptotic protease activator activity [Evidence IPI]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007420 - brain development [Evidence IMP]; GO:0006919 - caspase activation [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0007275 - development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0002217 - physiological defense response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 note : forebrain overgrowth product : apoptotic protease activating factor 1 protein_id : NP_001036023.1

name	Apaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347471 GeneID:11783 MGI:1306796
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0016505 - apoptotic protease activator activity [Evidence IPI]; GO:0005524 - ATP binding [Evidence IEA]; GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007420 - brain development [Evidence IMP]; GO:0006919 - caspase activation [Evidence TAS]; GO:0006952 - defense response [Evidence IEA]; GO:0007275 - development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0002217 - physiological defense response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 note : forebrain overgrowth product : apoptotic protease activating factor 1 protein_id : NP_033814.2

name	1200009F10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21630263 CCDS:CCDS24119.1 GeneID:67454 MGI:1914704
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0010165 - response to X-ray [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : IKK interacting protein isoform 2 protein_id : NP_081354.1

name	1200009F10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583481 GeneID:67454 MGI:1914704
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0010165 - response to X-ray [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : IKK interacting protein isoform 1 protein_id : NP_080442.2

name	Slc25a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526818 CCDS:CCDS24121.1 GeneID:18674 MGI:1353498
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : phosphate carrier, mitochondrial; solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 3 product : solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 protein_id : NP_598429.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949769 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform beta is encoded by transcript variant 2; lamina-associated polypeptide 2 product : thymopoietin isoform beta protein_id : NP_001073601.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949763 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform gamma is encoded by transcript variant 5; lamina-associated polypeptide 2 product : thymopoietin isoform gamma protein_id : NP_001073600.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949767 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform delta is encoded by transcript variant 4; lamina-associated polypeptide 2 product : thymopoietin isoform delta protein_id : NP_001073599.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949765 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform epsilon is encoded by transcript variant 3; lamina-associated polypeptide 2 product : thymopoietin isoform epsilon protein_id : NP_001073598.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949779 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform zeta is encoded by transcript variant 6; lamina-associated polypeptide 2 product : thymopoietin isoform zeta protein_id : NP_001073603.1

name	Tmpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949760 CCDS:CCDS24122.1 GeneID:21917 MGI:106920
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045449 - regulation of transcription [Evidence IDA] codon_start : 1 note : isoform alpha is encoded by transcript variant 1; lamina-associated polypeptide 2 product : thymopoietin isoform alpha protein_id : NP_035735.2

name	LOC100041769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261010 GeneID:100041769
definition	codon_start : 1 product : similar to protein translation factor sui1 homolog protein_id : XP_001477027.1

name	LOC100041799 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261014 GeneID:100041799
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477075.1

name	LOC667203 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261115 GeneID:667203
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins product : hypothetical LOC667203 pseudo : _no_value transcript_id : XR_034579.1

clone name	MSMg01-336C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068L05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-142H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-111L02.T7 (MSMg01no111_l02.b1)	MSMg01-111L02.TJ (MSMg01no111_l02.g1)
ACC	AG324299	AG324300
length	1,130	2,169
length of high quality (start - end)	716 (77 - 792)	---
definition	CHROMAT_FILE: MSMg01no111_l02.b1 PHD_FILE: MSMg01no111_l02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:16:20 2005	CHROMAT_FILE: MSMg01no111_l02.g1 PHD_FILE: MSMg01no111_l02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:16:20 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCCCTCAGTGCGCGCTATAGACTCACTATGGGAGAGGATCCGCGGAATT CAGATGACAGCCTTGCCTGTTGGTCCTTGTCTTCCACTTTGTTTAAGATG AGGTCTCTTCTTTGGCAATGTATATGCCGAGCTAGCTGGTTGGTGAGCTT CCTGGAATTCTCCTGCTCCTCACCCCTCCCCTTTCGCTGTAGGAGCTCTG GGGTTACAGACATGTGCTACCATGCCCGGAATTTTATGGATTCTAGGCAT CCAATCTTGGGTCCTCATACATCCACAAGTGTTGAACCCACTGAGCCACA GCCACAGCCCCACAAGGGACCCTACATGTTCTCTCTCATCTGTGCTTAAC GCAGAAGAACACAGCCACCTTAAAATCCACAGGTTGGAAATGACAGAGCC AAAAGATGGAAGCAGCCCAGTGTTCATTAGTCAGGAATGTCCATTGAACT TAACATAACTGGGAATCTTTACTGTATTAAGTCATTGAGACTTCAGGTTT GTCTAGTATAGCATCTAGTGCTGTCTTAGCTAATTAGTGTTGCCTTAACT AATGGCTTTTTAAATATGAGTTTCCTCATTGGAGTCTTTGCAATCCCCCA AGGTCATGAGAGTGGAAGAGCTGGCTGCAGTACCCAGGAGAGCTAACCCT GTGTCCCACCTGGGCAGCACAGTAGAGATGGCCCTGGTGGTGGAAGTGAG GGCCAACTGGCCCTGAGAGCATGAGTTTAGGATACCTGGCCCACTACTCA GCTCTAATATGGTGGTTTAGACAAGGGAAAAATTACCCCCTGCCCCAGCT ACCTGTGGCAGGCAGGAGAGCTGCCCATGAGATCATGAGAGCAGGAGAGC CGGTCCTGACTCTCACCTGCTGCAGCACTGGGGAGAGTGAACCCTGTGCC TCACCTGGGCAGCACAGTAAAACTTGCCCCCCTGGTGGGTTAAAGGGTGA AATTGGTCCCCAGGGGCTTAAAAACAGGGAAAACTGGGGCTTGCCCCTTT TTCCCGCCAGGGGGGGGAGCCAAATGGGAATGGGCGCCTGCAAAAACTTC CCCCTGTGCGGGTGGTGGTTGCCCCAAAAAACCTTGTCCAAACTTTATCC CATGTTACACTTACTCCCCCCTGTGGGCCN	ATAACATATACGATGTCGATCAGACTTATAAAATAGAAAAGAAGCATGTA AGGAGGGTGATTCCAATCACACGAGCTCGCACCTCTATATTAGTGCTGCG TGACCCGTATAAATTAGAATGGGTTGCACTCCAGCCCACTTTATTGTATA GAGAGTGNGGTAATGTATGGATAATATGATGTAACGCGAAATCAATACAC GATGAGAGTGCTCTCCTCGCTAATAGAACGAGAAACATCTTAGATAAGAT AGACGTAGTGCGAGAGATATTGTATGCTGATCTCTTGAACCGANCACATG ACGTTACTATGTCTATAGGATGCGTTTAAATAATGAGTACTGAGTCAGCG CATCATTGTCCACGATAGTGTGTGCTCTGGTGTGGTACATTAGAGAGATG CCTGGATGTCGTGGTGCTGATTGGATCAGTTAGATGATAATATCTGGTAT ATACATATACTGGATACCACTTCACGATGTTGTATTGGCATTTTGTACTG GATGCTTGCAGTATCAATAAAGATGAATTATGCACAATCTGATCGTGCAT AGTACAAGCAGTCGTGTGCTATACACGAATATAAGAAGGATATGGTTGTA CGATTGGTGTGGAGTGGATTGGGTAATTAGCCTCCTTGCCTTAGGAAACA CTCGTTGTGTCAGTATCTGTGTCTGTGACGATACGCGACGGGCATCTTCG CTGCTGTCTTATTCTAGTTGCTTAGCTTGAGTGTGCTTGCATTGGCTTTT CCTCGTGATCGGATATGTATAGTATACCTTAATTCTAAGGAGAATATTCT GCAGTATTGTGATGTTACTTACTTGGATACTCCACTATCTATGTGCTCAG CATCATGATGATATGACTCTTAAATAATTATTGTATTACTTGTTTGACTT TATGAAGTCCTTGACGTGTGTGTCTTATCGAATATTCGTATTGATACTAT TTGTCTGTGTGTTCACTACCGTGACACTATCTGTGCTTGTTATCTTACTC ATTCAATAAGATAGATTATGCTGCGCCTCTCAGTGTCGATCACTATGACT CTCTATTGCTTAAGATGTACGTCATTATAGGTGTGATAGTTCAGCAGTGA TAGGTGAAGGAGCACGTATGTGTGTTATGTGACTCCCAATATGCTTGGAT AGTCGTGTACTATAACATTACTTGAATAGTTGTGTGCGTACTAGGGATGC TCAGCGCTGACGATTAATGATACGGACATGACGACGAGTATCACACTGTG TATGGCCCTAATTTTTCCCGCACCCCCTTAAGATGAACAGATGAGGTGAC AGTTAACTACGTGTAATGTATTTATCGATGATATATAATGTCTGAGGTGC TCCGAACATAGAGTAACGTGGATAATATTCAGCACCTGTCGTGTATATAC ATACTATGCGTAGATTGGTTTAGGTAAGATGCTTGGAGATTGTACTGAGA CGCTAGTTGCTGTACTGATGCTTCCGTTGACAGTTATGTTTTAGATGCCG GACGGCTGATGGTGTATTTCTGTATATTACTGCGCGCATAGTCGTGTCAA TTCGAAAGTCTTGTATGCTTAGTCTCGTCAACGTACTATTGCAAATGTCA GTGTAATGTTGTGTACTATTAAACTCGCCTATGACAGTGCTTAGGAGTCA GATTGTACGTTCATCTTTTACGAACTTGGATCTCACATTGATACTATGTC ACTAGTTATCTCACGGATCGTTTATCGCGATTTTCATACGCGCGCGACAT ATGTATTCATGACCGTGTACTTATCTACCCATTCCTGACCACATCCGTAT CTCGATAGAGTGACACGATGATGATATATGTTTATTTATGGCCAAAGTTA CACTAGTATACTTGTGCATATCAGTGATGCTGAGCATTCTATGACATTAG AATTAATGAGTATATAGTATTTGACGCTATATGATTGTTTGATTTGTATG TTCGCATATCTATATGATTCCTGTGCGACATCTATGCTGTATGTGAAGAA TGTCACGTAATGTAGCAATCATGTACTCTNTGATCTGTGACGAACTATAT TCTGACACGACGTGCGTATGATCTGTATGCACAGATTATCACTAGTCACG TTGTACTATTATGCTGCATGACGCACTATGTCTTGCATACATGAATCTCT ACTGGTGTACTGGATACTG
quality values	Open. Hide. 0 3 7 6 6 6 6 7 7 7 8 8 10 15 15 19 16 13 10 8 8 12 12 17 24 21 17 12 8 8 8 22 22 33 36 37 40 42 42 42 42 34 37 37 37 33 43 43 42 35 34 28 28 35 44 53 44 41 37 37 37 26 21 17 11 9 9 9 12 12 18 18 15 24 29 26 21 21 23 29 35 50 53 53 42 42 47 47 47 47 47 42 42 42 50 50 50 68 68 68 68 68 41 41 15 24 21 33 33 37 33 42 42 42 42 32 35 35 37 37 48 48 51 57 57 57 59 59 68 68 48 48 48 48 48 50 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 52 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 62 44 43 43 35 21 21 39 43 43 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 57 57 59 57 57 59 59 68 68 68 59 59 57 59 59 59 59 68 68 68 68 68 68 68 59 59 59 59 57 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 59 54 54 54 57 57 57 54 59 59 59 59 68 68 57 57 57 57 57 57 59 59 59 48 48 48 57 57 57 57 57 48 48 48 57 57 57 48 48 48 48 48 50 42 42 41 44 59 43 34 31 39 43 47 59 59 46 46 48 48 48 48 48 57 43 57 38 43 42 42 47 47 48 48 39 41 41 59 41 41 41 39 39 39 31 31 39 39 37 43 43 50 59 50 50 48 48 50 48 57 57 57 46 43 37 37 37 37 40 39 23 18 10 10 10 19 21 30 33 30 21 24 24 28 28 36 48 48 48 44 44 37 37 37 43 41 37 37 37 30 22 21 16 14 18 26 41 59 46 43 43 37 28 28 23 22 28 23 25 26 30 39 39 39 32 37 37 37 37 37 39 39 39 39 39 35 34 34 32 39 37 37 33 33 33 37 37 41 28 33 28 22 22 13 16 9 8 8 8 8 19 15 30 27 26 22 27 21 23 20 20 21 21 15 14 15 19 18 23 21 21 15 21 21 17 17 10 12 12 14 21 22 19 22 11 22 15 19 14 23 12 16 15 22 19 24 11 19 16 16 14 18 15 13 8 8 8 8 9 19 28 18 14 14 16 16 16 28 25 27 27 13 13 10 10 8 10 10 10 12 13 19 12 9 8 7 7 8 10 10 15 29 24 21 18 9 11 11 11 12 11 10 8 8 8 8 8 9 13 8 12 11 11 12 11 11 9 8 8 10 10 12 12 15 9 8 8 8 8 8 11 11 10 10 12 11 9 8 8 8 8 8 8 8 10 14 14 16 11 11 10 10 11 13 11 11 9 9 9 9 9 11 17 13 12 10 10 10 10 10 10 10 10 10 11 10 11 19 16 14 12 8 8 8 8 8 8 8 8 8 9 9 9 10 10 10 11 11 15 15 12 12 8 8 8 8 8 9 9 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 10 9 10 8 8 8 8 8 8 8 9 9 9 6 8 6 6 8 6 8 8 8 6 8 8 13 16 16 11 10 10 10 10 13 10 9 9 9 9 9 10 10 9 8 8 8 8 10 18 21 22 25 23 14 14 12 11 10 10 10 10 8 8 8 8 8 10 15 9 6 8 8 8 7 7 10 10 8 12 8 8 6 6 8 7 8 8 8 8 8 8 9 14 12 12 7 7 6 6 6 6 6 6 3 0	Open. Hide. 7 8 8 8 8 6 7 8 8 8 6 6 6 6 6 6 8 8 10 12 11 6 6 6 6 13 19 17 11 11 6 6 6 6 6 6 6 8 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 10 7 8 8 8 9 9 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 6 6 8 8 8 10 8 8 8 8 8 9 8 8 6 9 8 8 8 8 8 8 8 8 9 8 8 9 7 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 9 9 9 6 6 6 6 6 6 6 8 8 8 8 3 0 3 6 6 7 6 6 8 8 9 10 10 8 8 7 8 8 7 7 8 8 8 8 8 8 8 8 8 8 8 10 15 12 12 10 8 8 8 8 8 6 6 8 8 6 6 8 8 9 9 10 10 9 11 8 8 8 8 8 8 9 9 9 8 10 8 8 8 8 8 8 8 8 8 8 8 8 6 6 9 10 10 10 8 6 8 6 7 10 10 9 8 8 6 6 8 6 6 8 6 8 10 8 8 10 12 8 8 8 8 8 6 8 6 7 7 7 8 8 10 10 13 8 8 6 6 6 6 8 8 8 8 8 8 8 3 0 3 8 8 8 9 10 10 10 8 8 8 8 8 8 8 8 6 6 6 6 9 9 9 10 13 9 9 9 9 8 8 11 13 11 11 11 10 8 8 8 8 8 8 8 10 8 8 8 6 6 6 8 8 11 8 12 9 9 9 10 10 9 8 8 6 6 8 8 8 8 8 6 6 6 8 8 8 10 8 8 10 8 8 6 6 8 6 6 6 6 8 8 6 7 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 7 8 7 6 9 10 8 8 8 6 6 6 6 8 8 10 10 11 10 8 8 8 8 7 7 8 8 8 6 6 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 9 9 9 12 8 8 8 8 8 6 7 8 8 8 8 8 8 8 6 6 6 6 8 6 6 8 8 18 13 14 14 8 8 8 9 9 7 8 8 8 6 8 6 6 8 8 8 8 8 8 8 8 8 8 9 9 10 10 10 8 8 8 8 8 8 10 8 8 8 6 6 6 8 8 10 8 8 8 6 9 9 9 9 9 11 11 11 11 11 18 8 8 8 8 8 8 9 9 8 8 8 6 6 8 8 8 10 10 10 8 10 8 6 6 6 6 8 8 6 6 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 9 10 10 10 8 8 8 10 8 8 8 8 8 8 8 8 10 10 12 9 9 9 8 7 7 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 9 8 8 8 8 6 6 8 6 6 8 8 8 8 10 8 8 6 6 6 6 8 8 8 8 10 13 12 8 8 6 6 8 8 8 8 8 8 8 6 6 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 10 10 11 11 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 11 11 10 10 10 10 8 8 6 6 8 6 6 8 8 8 6 6 8 6 6 6 6 8 8 8 8 8 10 8 8 6 6 8 8 6 6 8 8 13 12 8 8 7 7 6 8 8 8 8 6 7 9 9 10 8 8 8 8 8 12 10 8 8 8 8 6 7 9 9 9 9 9 9 10 10 9 9 9 9 10 11 13 11 10 10 10 8 8 8 8 8 8 7 6 6 6 8 8 8 8 8 8 8 8 10 10 11 10 8 8 8 8 8 8 6 6 8 6 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 7 8 8 12 8 8 8 8 8 8 10 8 8 8 8 8 6 6 8 8 8 8 8 8 8 6 6 8 10 13 15 11 10 9 9 6 8 6 7 10 7 7 8 6 6 8 8 10 11 11 8 8 8 6 6 6 7 10 6 6 8 8 6 7 8 6 8 8 8 6 6 6 6 8 8 9 9 9 9 10 9 9 9 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 7 7 8 8 9 10 9 9 9 9 9 9 10 10 11 11 13 13 8 8 6 6 8 8 9 7 7 8 8 8 8 6 6 10 10 8 9 9 12 8 8 8 8 8 8 8 8 10 12 12 12 8 8 8 8 8 8 9 8 8 8 8 8 9 7 10 6 6 8 8 11 11 10 11 10 10 9 8 8 8 8 8 8 8 8 10 8 8 8 8 6 8 6 7 10 10 13 9 9 8 8 8 8 8 8 6 9 8 8 8 8 8 8 8 8 6 8 6 7 10 10 10 11 8 8 6 6 8 8 10 11 10 10 6 6 6 6 6 6 6 6 8 6 6 6 7 7 6 8 8 8 8 6 6 6 6 8 6 6 6 8 8 8 8 10 8 12 8 9 6 8 8 8 8 8 6 6 8 8 10 10 7 7 7 6 6 6 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 12 11 8 8 6 7 8 8 10 10 8 8 6 7 10 8 10 10 10 8 9 9 8 8 8 8 8 8 10 8 8 8 9 9 8 8 8 6 6 6 6 8 8 8 6 6 8 10 10 10 8 8 8 8 6 6 6 6 8 8 6 6 8 6 7 6 6 8 6 8 8 8 7 7 7 8 10 10 11 8 8 9 9 10 8 8 8 8 8 8 8 11 11 9 7 6 6 7 13 9 14 17 9 9 6 6 6 6 9 12 17 18 14 15 10 9 10 10 10 10 8 8 6 6 8 8 6 7 10 10 10 8 8 8 8 8 8 8 8 6 6 8 8 6 6 6 7 10 8 8 8 8 7 10 6 6 8 8 6 6 8 8 8 6 6 6 6 8 8 8 8 8 8 8 10 9 9 9 9 12 10 12 12 11 11 10 10 8 8 10 8 6 6 6 6 8 8 11 10 8 8 6 6 6 6 8 6 8 8 8 8 8 6 6 8 8 10 11 11 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 11 11 11 8 8 8 8 10 8 8 8 8 8 8 6 6 8 10 7 7 7 7 7 6 8 8 8 10 10 10 10 10 8 8 6 6 7 6 8 6 6 6 6 10 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 8 8 6 8 6 6 6 6 8 8 9 11 8 8 8 8 8 10 8 8 6 6 8 8 8 6 6 8 8 8 8 10 10 10 10 10 11 13 8 8 8 8 8 8 13 10 11 10 11 11 11 11 8 8 6 6 8 8 8 8 8 8 8 6 6 6 8 10 10 14 13 10 8 6 6 7 8 10 6 6 8 6 11 15 17 15 10 10 10 10 8 8 8 8 6 6 6 6 10 8 6 6 6 6 8 8 8 7 6 8 8 6 6 8 8 8 10 8 9 9 9 9 6 8 6 6 8 8 7 7 8 8 8 8 8 8 10 8 8 8 8 8 8 8 10 8 10 8 8 8 10 6 6 6 6 6 8 6 6 8 8 6 6 8 8 6 6 8 8 8 7 9 8 8 11 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 10 10 8 8 8 10 10 8 8 8 8 10 8 7 6 8 8 8 8 8 8 8 8 7 6 10 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 6 8 6 6 8 8 9 9 8 8 6 6 6 6 8 7 8 10 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 8 6 8 6 6 8 8 10 6 6 8 8 8 8 8 8 8 8 8 6 6 10 8 10 10 8 8 8 8 8 8 8 8 8 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 7 10 10 8 8 6 6 8 8 8 8 6 6 6 6 8 10 8 8 8 10 10 7 6 8 8 8 8 6 6 8 8 8 8 6 6 6 8 8 8 8 8 8 8 6 6 8 8 10 8 8 8 8 10 9 12 12 10 10 8 8 8 8 8 8 8 10 10 10 9 9 9 9 9 13 13 10 10 10 8 8 8 8 8 8 8 8 8 8 10 10 9 6 8 6 6 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 9 9 8 8 7 6 10 6 8 8 8 8 12 9 9 8 8 8 8 6 10 6 6 6 8 8 8 8 6 9 9 9 8 8 8 8 8 6 6 6 6 8 8 13 15 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 6 7 10 8 10 9 10 8 10 10 10 10 10 11 11 10 8 10 8 8 6 8 3 0 3 10 10 8 8 8 8 8 8 8 12 10 8 8 8 8 8 10 10 10 9 9 8 8 6 8 8 8 10 9 9 10 10 10 8 8 8 8 8 8 8 10 10 8 8 6 6 6 6 8 8 6 6 8 8 8 6 6 6 6 13 16 8 8 6 6 8 8 6 6 7 10 10 10 10 8 6 6 6 6 6 8 8 11 8 8 8 8 13 10 10 9 10 8 8 6 6 7 6 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 11 8 6 6 6 8 8 8 8 8 8 8 8 12 11 6 6 6 6 10 6 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no111_l02.b1 MSMg01no111_l02.b1 CHROMAT_FILE:
MSMg01no111_l02.b1 PHD_FILE: MSMg01no111_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:20 2005
         (716 letters)



>mm_chr10_90696424_90697539
          Length = 1116

 Score = 1317 bits (681), Expect = 0.0
 Identities = 705/713 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgtcttccactttgtttaagatgaggtctcttctttggcaatgtatatgccgagctagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 ttgtcttccactttgtttaagatgaggtctcttctttggcaatgtatatgccgagctagc 895

                                                                       
Query: 61  tggttggtgagcttcctggaattctcctgctcctcacccctcccctttcgctgtaggagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tggttggtgagcttcctggaattctcctgctcctcacccctcccctttcgctgtaggagc 835

                                                                       
Query: 121 tctggggttacagacatgtgctaccatgcccggaattttatggattctaggcatccaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tctggggttacagacatgtgctaccatgcccggaattttatggattctaggcatccaatc 775

                                                                       
Query: 181 ttgggtcctcatacatccacaagtgttgaacccactgagccacagccacagccccacaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttgggtcctcatacatccacaagtgttgaacccactgagccacagccacagccccacaag 715

                                                                       
Query: 241 ggaccctacatgttctctctcatctgtgcttaacgcagaagaacacagccaccttaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ggaccctacatgttctctctcatctgtgcttaacgcagaagaacacagccaccttaaaat 655

                                                                       
Query: 301 ccacaggttggaaatgacagagccaaaagatggaagcagcccagtgttcattagtcagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ccacaggttggaaatgacagagccaaaagatggaagcagcccagtgttcattagtcagga 595

                                                                       
Query: 361 atgtccattgaacttaacataactgggaatctttactgtattaagtcattgagacttcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atgtccattgaacttaacataactgggaatctttactgtattaagtcattgagacttcag 535

                                                                       
Query: 421 gtttgtctagtatagcatctagtgctgtcttagctaattagtgttgccttaactaatggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gtttgtctagtatagcatctagtgctgtcttagctaattagtgttgccttaactaatggc 475

                                                                       
Query: 481 tttttaaatatgagtttcctcattggagtctttgcaatcccccaaggtcatgagagtgga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tttttaaatatgagtttcctcattggagtctttgcaatcccccaaggtcatgagagtgga 415

                                                                       
Query: 541 agagctggctgcagtacccaggagagctaaccctgtgtcccacctgggcagcacagtaga 600
           |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 414 agagctggctgcagtacccaagagagccaaccctgtgtcccacctgggcagcacagtaga 355

                                                                       
Query: 601 gatggccctggtggtggaagtgagggccaactggccctgagagcatgagtttaggatacc 660
           |||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 354 gatggccctggtggtggacgtgagggccagctggccctgagtgcatgagttttggatacc 295

                                                                
Query: 661 tggcccactactcagctctaatatggtggtttagacaagggaaaaattacccc 713
           |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 294 tggcccactactcatctctaatatggaggtttagacaagggaaaaattacccc 242


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 716
Length of database: 1116
Length adjustment: 10
Effective length of query: 706
Effective length of database: 1106
Effective search space:   780836
Effective search space used:   780836
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information