Query= MSMg01no112_f18.b1 MSMg01no112_f18.b1 CHROMAT_FILE:
MSMg01no112_f18.b1 PHD_FILE: MSMg01no112_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:30 2005
(476 letters)
>mm_chr10_95495897_95496771
Length = 875
Score = 890 bits (460), Expect = 0.0
Identities = 472/476 (99%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 1 caaataatagcatagattatagccaacagaaatacccagtgagcaaactatttcataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 caaataatagcatagattatagccaacagaaatacccagtgagcaaactatttcataaat 616
Query: 61 gatccagcagatggggctaacggcacagactaggccagtctggtcaaccctactggtgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gatccagcagatggggctaacggcacagactaggccagtctggtcaaccctactggtgtc 556
Query: 121 cgaggagacactgtaaggctgaggtatacactgacagctacaacagctatgacagaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cgaggagacactgtaaggctgaggtatacactgacagctacaacagctatgacagaaagc 496
Query: 181 cttacacaggcaactgtcacgctgtagaatgctttcttgtctcccttcgctctcacattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cttacacaggcaactgtcacgctgtagaatgctttcttgtctcccttcgctctcacattt 436
Query: 241 gagatcagctcactgaagcaaaagagaaaaaaggctgacaaaaatagttatctggtgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gagatcagctcactgaagcaaaagagaaaaaaggctgacaaaaatagttatctggtgaat 376
Query: 301 ggcacagaaggagggcttcgagtaaacccaacagctcttccagtcacggttctgctctgc 360
| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 375 agtaaagaaggagggcttcgagtaaa-ccaacagctcttccagtcacggttctgctctgc 317
Query: 361 tgtcagccggcctgcctcacctgccaaaggagtgtcacagcagaggctccatcgcgcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgtcagccggcctgcctcacctgccaaaggagtgtcacagcagaggctccatcgcgcctg 257
Query: 421 ctgtgaaacgctccctaggcctgccctatgctttctcatttgtgcagattacatgg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctgtgaaacgctccctaggcctgccctatgctttctcatttgtgcagattacatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 875
Length adjustment: 10
Effective length of query: 466
Effective length of database: 865
Effective search space: 403090
Effective search space used: 403090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_f18.g1 MSMg01no112_f18.g1 CHROMAT_FILE:
MSMg01no112_f18.g1 PHD_FILE: MSMg01no112_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:30 2005
(336 letters)
>mm_chr10_95368921_95369656
Length = 736
Score = 491 bits (254), Expect = e-143
Identities = 272/278 (97%)
Strand = Plus / Plus
Query: 31 cattcattcattcattcatttgccatgctaagcatcaaagctagaacctgcctctgactt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cattcattcattcattcatttgccatgctaagcatcaaagctagaacctgcctctgactt 290
Query: 91 tagccattcttgttggctctaggaccattttctcactttcaaaaactattggttctgtca 150
||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 291 tagccattcttgtgggctctaggaccattttctcactttcgaaaactaatggttctgtca 350
Query: 151 gcttccaaggctccagatagagttacctggatccagatagagttacgttctcaatggcta 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gcttccaaggctccagatagagttacctggatccagatagagttacgttctcaatggcta 410
Query: 211 tctgtagggctggttatacaatctaaaatatggtagtgggggtgggagggtaataagatc 270
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tctgtagggctggtaatacaatctaaaatatggtagtgggggtgggagggtaataagatc 470
Query: 271 ctgtgacgtgaacttgatcagtaagaaacacgacaggc 308
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 471 ctgtgatgtgaacttgatcagtaagaaacatgacaggc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
