Query= MSMg01no113_d04.b1 MSMg01no113_d04.b1 CHROMAT_FILE:
MSMg01no113_d04.b1 PHD_FILE: MSMg01no113_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:34 2005
(179 letters)
>mm_chr10_54438510_54439088
Length = 579
Score = 325 bits (168), Expect = 1e-93
Identities = 177/180 (98%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 1 tgtctccatatctataatatatatatatac-tgtgtaatatatataataacatatactgt 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 201 tgtctccatatctataatatatatatatatatgtgtaatatatataataacatata-tgt 259
Query: 60 gtttcttattagctctttttcttctgttttgtcctattccaatttgttatggttttattt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtttcttattagctctttttcttctgttttgtcctattccaatttgttatggttttattt 319
Query: 120 tattattatcctgtaaatgtctgtctgtattctaaaaagagacagatagggtgtaacttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tattattatcctgtaaatgtctgtctgtattctaaaaagagacagatagggtgtaacttc 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no113_d04.g1 MSMg01no113_d04.g1 CHROMAT_FILE:
MSMg01no113_d04.g1 PHD_FILE: MSMg01no113_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:34 2005
(220 letters)
>mm_chr10_54598984_54599604
Length = 621
Score = 412 bits (213), Expect = e-120
Identities = 219/221 (99%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 tttataa-acatacatgataaaggaaggataggggaagggactgggatgataatttaaac 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttataagacatacatgataaaggaaggataggggaagggactgggatgataatttaaac 362
Query: 60 ccaaatctaactgttaagatgcccattgccagctacgtaacagcagggatatacacagcc 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 ccaaatctaactgttaagatgcccattgccagctacataacagcagggatatacacagcc 302
Query: 120 agttctgactactggggaaagtgtatgccctccccatggacgttctgccaacatttccta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttctgactactggggaaagtgtatgccctccccatggacgttctgccaacatttccta 242
Query: 180 ttaccagagctttgcagcaaattctctgctgtgtatatagt 220
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaccagagctttgcagcaaattctctgctgtgtatatagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
