Query= MSMg01no114_a01.b1 MSMg01no114_a01.b1 CHROMAT_FILE:
MSMg01no114_a01.b1 PHD_FILE: MSMg01no114_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:36 2005
(315 letters)
>mm_chr10_113122643_113123357
Length = 715
Score = 462 bits (239), Expect = e-134
Identities = 293/311 (94%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttgctttactgcgctggtaattatgcatgttcttgactcattattaagactcc 63
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgctttactgtgctggtaaatatgcatgttcttgactcattattaagactcc 263
Query: 64 atttactgttcagcattcccttagtattattcacaatgattagtttcaactgacatttgt 123
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 atttactattcagcattcccttactattattcacaatgattagtttcaactgacatttgt 323
Query: 124 tcagatttttctctttctatcttctgaatactcaaatctgtagttaaatccattaaatat 183
||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 324 tcagatttttctcattctatcttctgaatactcatatctctagttaaatccattaactat 383
Query: 184 tttatattatatatctcatgacaagaacatctagttagactttttgaagttatttgcatt 243
|||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 384 tttatattatgtctctcatgacaagaacatctatttagactttttgaagtgatttgcatt 443
Query: 244 tcagcattaatgctattaatacatattt-caaatatttatcccagtgatcagtttttgtt 302
|||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||
Sbjct: 444 tcagcattaatgctattaatacatatttacaa-tatgtatccccttgatcagtttttgtt 502
Query: 303 gtcttattgtt 313
||||| |||||
Sbjct: 503 gtctttttgtt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_a01.g1 MSMg01no114_a01.g1 CHROMAT_FILE:
MSMg01no114_a01.g1 PHD_FILE: MSMg01no114_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:36 2005
(220 letters)
>mm_chr10_113234230_113234849
Length = 620
Score = 393 bits (203), Expect = e-114
Identities = 215/219 (98%)
Strand = Plus / Minus
Query: 1 ttgatcttaggagttctgataggactctgagttcttggttgatgttgacgaactttgtgg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 419 ttgatcttaggagttctgataggactctgagttcttggttgatgttgatgaactttgtgg 360
Query: 61 ctataatctcttctcttttagagcagattctgcatatttttactctgagttttgtttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctataatctcttctcttttagagcagattctgcatatttttactctgagttttgtttgtc 300
Query: 121 tttggaggctatctagagccatgtagggaacaaagtaagggggtggcgggtcctggggtc 180
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 299 tttggaggctatctagagccatgtagggaacgaagtaagggggtggggggtcctggggtc 240
Query: 181 cctggggaaaagtgggaaggaaaaaatatgccacatctg 219
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 239 cctgaggaaaagtgggaaggaaaaaatatgccacatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
