Query= MSMg01no114_i10.b1 MSMg01no114_i10.b1 CHROMAT_FILE:
MSMg01no114_i10.b1 PHD_FILE: MSMg01no114_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:14 2005
(308 letters)
>mm_chr10_87670063_87670770
Length = 708
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 1 ttaggacttcttttttattattttttgtaaagaactcaactttcttaaaactccatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggacttcttttttattattttttgtaaagaactcaactttcttaaaactccatgcat 260
Query: 61 actaggctactttgtaaataattcttctttgcctgctgagaacagaggccagagaaagga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 actaggctactttgtaaataattcttctttgcctgctgagaaccgaggccagagaaagga 320
Query: 121 aggaagttgaatcagacccaagttacaaagtttttagggtcatctcctcttccttcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaagttgaatcagacccaagttacaaagtttttagggtcatctcctcttccttcacaa 380
Query: 181 atcctcagtaaacatttttgttctgtcctagtcagcacaactgtatgatggcccactgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctcagtaaacatttttgttctgtcctagtcagcacaactgtatgatggcccactgta 440
Query: 241 gctggtctttgctactttgtaggtacttctttctcccacc-tttctcccccagtcccacc 299
|||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||
Sbjct: 441 gctggtctttgctactttgtaggttcttctttctcccaccctttctccccca-tcccacc 499
Query: 300 ccccccacc 308
|||||||||
Sbjct: 500 ccccccacc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_i10.g1 MSMg01no114_i10.g1 CHROMAT_FILE:
MSMg01no114_i10.g1 PHD_FILE: MSMg01no114_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:14 2005
(161 letters)
>mm_chr10_87869728_87870288
Length = 561
Score = 304 bits (157), Expect = 2e-87
Identities = 160/161 (99%)
Strand = Plus / Minus
Query: 1 cacctggggcagaagtggaactaggcatctgcagcctgccttcctagtcacttattttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacctggggcagaagtggaactaggcatctgcagcctgccttcctagtcacttattttct 302
Query: 61 ctcctgcacttccagggtttctctccccactgcaaccatattcagaaacatcccctaggt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcctacacttccagggtttctctccccactgcaaccatattcagaaacatcccctaggt 242
Query: 121 gtttcctgcacactccttggtgggcctcacacagtagccgg 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttcctgcacactccttggtgggcctcacacagtagccgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
