Query= MSMg01no114_o14.b1 MSMg01no114_o14.b1 CHROMAT_FILE:
MSMg01no114_o14.b1 PHD_FILE: MSMg01no114_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:43 2005
(329 letters)
>mm_chr10_29305464_29306192
Length = 729
Score = 621 bits (321), Expect = 0.0
Identities = 324/325 (99%)
Strand = Plus / Plus
Query: 5 gaattcttttctttctgggtaggtcaaggtattctatttctaatacatgcagaacaagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttctttctgggtaggtcaaggtattctatttctaatacatgcagaacaagaa 264
Query: 65 tcactcttgattttgttattatttagataggaacatccaagatttaagggaggtactttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcactcttgattttgttattatttagataggaacatccaagatttaagggaggtactttt 324
Query: 125 aacaggacagcttttgttttccctccaataattcatcaataaactaaatagaatttaagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaggacagcttttgttttccctccaataattcatcaataaactaaatagaatttaagt 384
Query: 185 agattgacttagttgtgccctagggttttgcctcttgtctgatgcttttaattttaagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agattgacttagttgtgccctagggttttgcctcttgtctgatgcttttaattttaagat 444
Query: 245 ggcaaacattatttgacattaccctctcacaacaattccctattattaaatattttctga 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggaaacattatttgacattaccctctcacaacaattccctattattaaatattttctga 504
Query: 305 gaacaaggtgtggtttcttagtttt 329
|||||||||||||||||||||||||
Sbjct: 505 gaacaaggtgtggtttcttagtttt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_o14.g1 MSMg01no114_o14.g1 CHROMAT_FILE:
MSMg01no114_o14.g1 PHD_FILE: MSMg01no114_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:43 2005
(426 letters)
>mm_chr10_29448914_29449741
Length = 828
Score = 777 bits (402), Expect = 0.0
Identities = 421/428 (98%), Gaps = 2/428 (0%)
Strand = Plus / Minus
Query: 1 tcacctgctttattttctccactcttcttgtgactaggtgacttac--tttatttttttt 58
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 628 tcacctgctttattttctccactcttcttgtgactaggtgacttactttttttttttttt 569
Query: 59 actcacttttctttctatttcccactatcttacccagaatataggaaaaacattaccctt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 actcacttttctttctatttcccactatcttacccagaatataggaaaaacattaccctt 509
Query: 119 gaatgcagctatataatacctacctagcctatcagcaaaataccattgatcctttaaggt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaatgcagctatataatacctacctagcctatcagcaaaataccattgatcctttaaggt 449
Query: 179 atagttctgtcaataaccacaccttaaacaaatattgtttaaaggttaaagcatgctatg 238
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atagttctgtcaataaccacaacttaaacaaatattgtttaaaggttaaagcatgctatg 389
Query: 239 ttccagttatatttgaactctctagcttcttacagagagacaattaaatgccctttaaac 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttccagttatatttgaactctctagcttcttacagagagacaattaaatgccctttaaat 329
Query: 299 gatcaagtattgaactaatcgaaaatgaagaacaaaagatggcgaactgagagctataaa 358
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 328 gatcaagtattgaactaatcgaaaatgaagaacaaaagatggtgaactgagagctataaa 269
Query: 359 tatttcattagcactgagaacaagtatatatagataaatgtgcctgtgatggtttgtata 418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 268 tatttcattagcactgagaacaagtatatatagctaaatgtgcctgtgatggtttgtata 209
Query: 419 ttcttgga 426
||||||||
Sbjct: 208 ttcttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 828
Length adjustment: 9
Effective length of query: 417
Effective length of database: 819
Effective search space: 341523
Effective search space used: 341523
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
