XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAT
ACCACACTCTCATCAATGGAAACACAAACTAAACAGAAACACATTGAAAC
TAACAGAAGTTATGGACCAAATGGATTTAATAGAAAAAAAAAAAGAATAG
AACATTTCATCCTAAAACAAAAGAATATACCTTCTTCTCAGCACCTCATA
GTACCTTCTTCAAAATTGACCATATAATTGGTCACAAAACAGGCTTCAAC
AGATACAAGAAGACTAAAATATTCCCATGCATCCTATCAGATCACCACAG
ACTAAGGCTGGTCTTCAATAGCAACAAAAACAACAGAAAGCCTACATACA
AGTGGAAGCTGAACAACCCCGTACTCATTGATAACTTGGTCAAAGAAGAA
GTGAAGAACGAAATTAAAGACTTTTTAGAATTTAATGAAAATGAAGGCAC
AACATACCCAAACTTATGGGACACAATGAAAGCAGTGCTAGGAGGAAAAC
TCGTAGCTCTGACTGCCTCCCAAAAGAAACTAGAGAGAGCACACACTACC
AGCTTAACAGCACACCTGAAAGCTCTAGAATAAAAAGAAGCAAATATACC
CAAGAGGAGTAGATGGCAGGAAATAATCCAACTCAGGGCTGACATCAACA
AGTAGAACAAAAAAGAACCATACCAAGAATCCACAAAACCAGGAGCTGGT
TCTTTGAGAAAATCCACACGATAGATGG

NTTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTTCTGACAAATCAGCTGTTTGACT
AGGATGGAGCGGTGATAGATCACCTTGTGAGTTGTTTGTGGAGCCTTCAA
TTTGAAGTGTATTTTCAAAAAGTTAAAATGTTGAACTCCCAGTTTAAAAA
AAAATACAAATAAAATTCTGTACAGGGGAGTTGGTTTTCTTTGTGTAGCC
ACTGATAGGGTGATCATTCTCCATTGGATGGCAGTGGGTCCAAGAGTATG
TGGACAGTACAAATTGTACTTTGTGGTCTTAAAACAAGAAAACCAAGAGG
ATACAAGTTGGGTGGGAGTAGGCTGGTGAGTGTGATTAAAATATGTTTAT
GAAATTCTCAAAGAACTAACAATAAAAACAATGCAGGGAATTATATAACT
GCCAGGAGATAAAGCTAAAAACCAGCATTTAACCATGAACTCAGATCCAT
TGTAGTAATGTGCACTGAACACACCCAAGATGGGCCATATCAACAGTCAG
TCAAGGAAGGGGGAGGGGCTCCTGGGCTCTATTCCATCTCTGCACTCCTG
GTTCTTCTTATGTCCTGAAAAGGGAGAATCACTATCTATAGTTGTATACC
CTATCACTGTATATTGATTCCCCCAGTCTCCCATGGAAGGCCGTTAACCC
TCAGGTCTATTATTGTCCTC

Query= MSMg01no115_c11.g1 MSMg01no115_c11.g1 CHROMAT_FILE:
MSMg01no115_c11.g1 PHD_FILE: MSMg01no115_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:01 2005
         (488 letters)



>mm_chr10_24930164_24931054
          Length = 891

 Score =  899 bits (465), Expect = 0.0
 Identities = 484/491 (98%), Gaps = 3/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcttctgac-aaatcagctgtttgactaggatggagcggtgatagatcaccttgtgagtt 59
           ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 691 tcttctgacaaaatcagctgtttgactaggatggatcggtgatagatcaccttgtgagtt 632

                                                                       
Query: 60  gtttgtggagccttcaatttgaagtgtattttcaaaaagttaaaatgttgaactcccagt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gtttgtggagccttcaatttgaagtgtattttcaaaaagttaaaatgttgaactcccagt 572

                                                                       
Query: 120 ttaaaaaaaaa--tacaaataaaattctgtacaggggagttggttttctttgtgtagcca 177
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttaaaaaaaaaattacaaataaaattctgtacaggggagttggttttctttgtgtagcca 512

                                                                       
Query: 178 ctgatagggtgatcattctccattggatggcagtgggtccaagagtatgtggacagtaca 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctgatagggtgatcattctccattggatggcagtgggtccaagagtatgtggacagtaca 452

                                                                       
Query: 238 aattgtactttgtggtcttaaaacaagaaaaccaagaggatacaagttgggtgggagtag 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aattgtactttgtggtcttaaaacaagaaaaccaagaggatacaagttgggtgggagtag 392

                                                                       
Query: 298 gctggtgagtgtgattaaaatatgtttatgaaattctcaaagaactaacaataaaaacaa 357
           ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 391 gctggtgagtgtgattaaaatatgtttattaaattctcaaagaactaaaaataaaaacaa 332

                                                                       
Query: 358 tgcagggaattatataactgccaggagataaagctaaaaaccagcatttaaccatgaact 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgcagggaattatataactgccaggagataaagctaaaaaccagcatttaaccatgaact 272

                                                                       
Query: 418 cagatccattgtagtaatgtgcactgaacacacccaagatgggccatatcaacagtcagt 477
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagatccattgtagtaatgttcactgaacacacccaagatgggccatatcaacagtcagt 212

                      
Query: 478 caaggaagggg 488
           |||||||||||
Sbjct: 211 caaggaagggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 891
Length adjustment: 10
Effective length of query: 478
Effective length of database: 881
Effective search space:   421118
Effective search space used:   421118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)