Query= MSMg01no115_e20.b1 MSMg01no115_e20.b1 CHROMAT_FILE:
MSMg01no115_e20.b1 PHD_FILE: MSMg01no115_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:13 2005
(598 letters)
>mm_chr10_24242284_24243280
Length = 997
Score = 1104 bits (571), Expect = 0.0
Identities = 589/595 (98%), Gaps = 1/595 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttaggaatgttatcattgaacacatcttgttggattcaaataattcccttcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ggaattcttaggaatgttatcattgaacacatcttgttggattcaaataattcccttcaa 738
Query: 64 taccttcaaaagaggtactcttcactttagtctttgagaatggagtacctagttaagagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taccttcaaaagaggtactcttcactttagtctttgagaatggagtacctagttaagagt 678
Query: 124 cggacatgtgtgagatgggctgtgctcagctctttgccattagagttccgtgacaaaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cggacatgtgtgagatgggctgtgctcagctctttgccattagagttccgtgacaaaata 618
Query: 184 tttgacaaaaatctacatttagccttgaggtttcatttagatctaaggtttcagttgaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tttgacaaaaatctacatttagccttgaggtttcatttagatctaaggtttcagttgaag 558
Query: 244 agatatacataatttaagtcaacgttaggttctgtctaccatggtctcagcctagtctca 303
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 557 agatatacataatttaagtcaacgttaggttctgtctaccatggtctcagtctagtctca 498
Query: 304 actgcaaggtgaaccgatatttttaaatctgtgacagacacaagttccttctcttttgga 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 497 actgcaaggtgaaccgatattttaaaatctgtgacagacacaagttccttctcttttgga 438
Query: 364 ttccaggccaatcgcttggctttgttgttttagagatgagatgaggcatagcaccactgt 423
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 437 ttccagg-gaatcgcttggctttgttgttttagagatgagatgaggcatagcatcactgt 379
Query: 424 gggaagacgtgatgcaacaaagctggtcacctcctatcagctgaggtcacctcctgtcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gggaagacgtgatgcaacaaagctggtcacctcctatcagctgaggtcacctcctgtcag 319
Query: 484 ctgaggagtgggcaagagaaagagagggaagcatggcatctagacagagcagtcacaggg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgaggagtgggcaagagaaagagagggaagcatggcatctagacagagcagtcacaggg 259
Query: 544 gtggtggccccacttcctattacctgatcccatctcctaaaaggttgtactatct 598
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 258 gtggtggccccacttcctattatctgatcccatctcctaaaaggttgtactatct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 997
Length adjustment: 10
Effective length of query: 588
Effective length of database: 987
Effective search space: 580356
Effective search space used: 580356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_e20.g1 MSMg01no115_e20.g1 CHROMAT_FILE:
MSMg01no115_e20.g1 PHD_FILE: MSMg01no115_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:13 2005
(443 letters)
>mm_chr10_24103455_24104297
Length = 843
Score = 828 bits (428), Expect = 0.0
Identities = 440/444 (99%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 1 tggcctggtctttgacttgca-cattcaatatggttcttgtttgagacggtgagcagaag 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tggcctggtctttgacttgcaacattcaatatggttcttgtttgagacggtgagcagaag 259
Query: 60 catctctgagcattcagaggatagaatgttcagtcttcatgacgaccctgtgaaccactg 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagctctgagcattcagaggatagaatgttcagtcttcatgacgaccctgtgaaccactg 319
Query: 120 atattcatcatgggatcaaggaaactgaagcacagagcagttaatacagtaaccaagggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atattcatcatgggatcaaggaaactgaagcacagagcagttaatacagtaaccaagggg 379
Query: 180 tacacagttaggaaatatagtcaggactcaacccagactgctcggaaccagagtccacat 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 tacacagttaggaaatatagtcaggactcaacccagacagctcggaaccagagtccacat 439
Query: 240 tcttaattattgccatatgtgtttgaaagaaaaagtttaaaccccaaaccatattagaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcttaattattgccatatgtgtttgaaagaaaaagtttaaaccccaaaccatattagaac 499
Query: 300 aacagagaagggagctttcactaactaaaactgtgggaaaaacttgaaagttggaaaaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aacagagaagggagctttcactaactaaaactgtgggaaaaacttgaaagttggaaaaca 559
Query: 360 aatagaaacagagaagcacttggtaaacaatgagagcaggaggcagagatgaggtgggtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatagaaacagagaagcacttggtaaacaatgagagcaggaggcagagatgaggtgggtg 619
Query: 420 gggaggagacaggagccctggaaa 443
||||||||||||||||| ||||||
Sbjct: 620 gggaggagacaggagccatggaaa 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
