Query= MSMg01no115_o14.b1 MSMg01no115_o14.b1 CHROMAT_FILE:
MSMg01no115_o14.b1 PHD_FILE: MSMg01no115_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:59 2005
(627 letters)
>mm_chr10_129456615_129457644
Length = 1030
Score = 1131 bits (585), Expect = 0.0
Identities = 616/627 (98%), Gaps = 3/627 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcaataatgaaaaaatac-tacattcaatatgtgtttatgaatccttacacag 62
||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 830 ggaattctcaataatgaaaaaatacatacattcaatatgtatttgtgaatccttacacag 771
Query: 63 ttgtgcatttccaaagaaataatatgtgatttaaatacctaactgtatttaaatcttcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ttgtgcatttccaaagaaataatatgtgatttaaatacctaactgtatttaaatcttcaa 711
Query: 123 tctttgcttttaaattgtatgtccaactagatgattaattaatgtactaatgatagtatt 182
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tctgtgcttttaaattgtatgtccaactagatgattaattaatgtactaatgatagtatt 651
Query: 183 taaaatagc--aaaaaaaaatccctagtatgtaaactaatgactcaattacagtttaaat 240
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 650 taaaatagcaaaaaaaaaaatccccagtatgtaaactaatgactcaattacagtttaaat 591
Query: 241 aaaaataacaaattctttgactctcagttatataacaactacttatatgattcttatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aaaaataacaaattctttgactctcagttatataacaactacttatatgattcttatata 531
Query: 301 attatgtcaaggtgtagcagaactatcaacttgaattttaaaccaacttcctcatctatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 530 attatgtcaaggtgtagcagaactatcaacttgaattttaaaccaacttcctcatttatg 471
Query: 361 atttgcatcaacactgttttactgtctctactgatccttgaatttttcattattattcac 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 470 atttgcatcaacactgttttactgtctctactgatccttgaaattttcattattattcac 411
Query: 421 tgggaaagtaaataatttaagggcatagatttaatattaaatgattgtaggttccaataa 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 410 tgggaaagtaaataatttaagggcatagatttaatattaaatgtttgtaggttccaataa 351
Query: 481 aagtgattttttaaacatgtctagggcttactttctcttgtgtgtatttaaaggattgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagtgattttttaaacatgtctagggcttactttctcttgtgtgtatttaaaggattgga 291
Query: 541 atagaaatatttatgaactattaaactatctagcatctctgctgtaaacctgttccacta 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 290 atagaaatatttatgaactattaaactatctagcatctctgctataaacctgttccacta 231
Query: 601 cttattaaatattattgtagggaaaag 627
|||||||||||||||||||||||||||
Sbjct: 230 cttattaaatattattgtagggaaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1030
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1020
Effective search space: 629340
Effective search space used: 629340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_o14.g1 MSMg01no115_o14.g1 CHROMAT_FILE:
MSMg01no115_o14.g1 PHD_FILE: MSMg01no115_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:59 2005
(625 letters)
>mm_chr10_129447927_129448951
Length = 1025
Score = 1203 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Plus
Query: 1 atagagtctgacctttgcctttttatttctatattctgaatattataaaggcaactaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagagtctgacctttgcctttttatttctatattctgaatattataaaggcaactaaga 260
Query: 61 taatgtttctttgagctagttgacttataggaaagttgctaaaacaacagtttctattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgtttctttgagctagttgacttataggaaagttgctaaaacaacagtttctattca 320
Query: 121 ctcctcattctacctccctagttatatgttattagcatataataaaataaaactataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctcattctacctccctagttatatgttattagcatataataaaataaaactataata 380
Query: 181 atatgacataaaaaatcaagagactaacattattgaaatacttaagtaaaagaaatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgacataaaaaatcaagagactaacattattgaaatacttaagtaaaagaaatattt 440
Query: 241 caaatggattccactagttctcaaatgaaagtcaatttcatgttacattcttttgttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaatggattccactagttctcaaatgaaagtcaatttcatgttacattcttttgttttt 500
Query: 301 ctttttccttactttttccttactctttgactcagttcttcagtcatctcttcactccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttttccttactttttccttactctttgactcagttcttcagtcatctcttcactccag 560
Query: 361 ttttatgatgttgacatttaagtataatatttgtattatttttttgagaattttatattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttatgatgttgacatttaagtataatatttgtattatttttttgagaattttatattc 620
Query: 421 atataagctgcattttaatcataatcgcacactcctcccacatctccttcaatatccata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atataagctgcattttaatcataatcgcacactcctcccacatctccttcaatatccata 680
Query: 481 ctgatatttttgaagaatatttacaagttattcagtccttcagtgctgatggagctaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgatatttttgaagaatatttacaagttattcagtccttcagtgctgatggagctaatg 740
Query: 541 tttttatgtgattggaataaaaatgtacatttaacacaattacaaaagaactgtgttcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttatgtgattggaataaaaatgtacatttaacacaattacaaaagaactgtgttcta 800
Query: 601 ggcacatcataccgaagtgctg 622
||||||||||||||||||||||
Sbjct: 801 ggcacatcataccgaagtgctg 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
