Query= MSMg01no116_h09.b1 MSMg01no116_h09.b1 CHROMAT_FILE:
MSMg01no116_h09.b1 PHD_FILE: MSMg01no116_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:43 2005
(351 letters)
>mm_chr10_105397010_105397764
Length = 755
Score = 598 bits (309), Expect = e-175
Identities = 336/347 (96%), Gaps = 6/347 (1%)
Strand = Plus / Minus
Query: 10 gaattcatttattcc--aattcaaatttaagtaagtagcgtgtgtgtgaggtctcagcag 67
||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 383 gaattcattta-tccaaaattcaaatttaaataagtatcgtgtgtgtgaggtctcagcaa 325
Query: 68 catcctctgtatgcgtatgtatataaatgtgcacaccaaactg---aaaaaaaaagaaga 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 324 catcctctgtatgcgtatgtatataaatgtgcacaccaaactgaaaaaaaaaaaagaaga 265
Query: 125 gatatttaaaatattttagcatcatttgttttgttgtggatcattttgtttgttgtttgt 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gacatttaaaatattttagcatcatttgttttgttgtggatcattttgtttgttgtttgt 205
Query: 185 ttgcttatgacaagttatcactatgtagtccaaactggcctgaaagtcactatataactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttgcttatgacaagttatcactatgtagtccaaactggcctgaaagtcactatataactt 145
Query: 245 aagttggcttcaccatcaacacaatctacctgctccatgcatcaaagcacttggatttca 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 144 aagttggcttcaccatcaacacaatctacctgctccaggcatcaaagcacttggatttca 85
Query: 305 ggagtgaccaagttttctacaataatatctcaggagatcattgttaa 351
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ggagtgaccaagttttctacaataatatctcaggagatcattgttaa 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 755
Length adjustment: 9
Effective length of query: 342
Effective length of database: 746
Effective search space: 255132
Effective search space used: 255132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_h09.g1 MSMg01no116_h09.g1 CHROMAT_FILE:
MSMg01no116_h09.g1 PHD_FILE: MSMg01no116_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:43 2005
(284 letters)
>mm_chr10_105233176_105233859
Length = 684
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%)
Strand = Plus / Plus
Query: 1 atttctccaatggctggacattgagcaaattgttcaaccaactatatcttatttttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttctccaatggctggacattgagcaaattgttcaaccaactatatcttatttttaaaa 260
Query: 61 acttactctatgcttatgtaaaccaacacgttgtgatgcccacatatacctagtgaaagg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 acttactctatgcttatgtaaaccaacacgttgtgatgcccacatataactagtgaaagg 320
Query: 121 attagttcagctaagccatttcacatctctattattgtatgtttttgtgtgtatgtggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attagttcagctaagccatttcacatctctattattgtatgtttttgtgtgtatgtggta 380
Query: 181 agagcactatgctcagaatatttaagaatataatactagaatattaattattatcttcat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 agagcactatgctcagaatatttaagaatataatactataatattaattattatcttcat 440
Query: 241 tctataatttagttttctagattcattcttccaaactaattgc 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctataatttagttttctagattcattcttccaaactaattgc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
