Query= MSMg01no117_l11.b1 MSMg01no117_l11.b1 CHROMAT_FILE:
MSMg01no117_l11.b1 PHD_FILE: MSMg01no117_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:21 2005
(533 letters)
>mm_chr10_102303690_102304624
Length = 935
Score = 936 bits (484), Expect = 0.0
Identities = 524/548 (95%), Gaps = 19/548 (3%)
Strand = Plus / Plus
Query: 4 gaattcagctaggtctc-aattatacgttgagtatcacgtgcagacacatagagccatga 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagctaggtctataattatacgttgagtatcacgtgcagacacatagagccatga 263
Query: 63 gtatcttaatgatagtgatgccctctgagaaataagcggctgggtgattttgtctttgtg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtatcttaatgatagtgatgccctctgagaaataagcggctgggtgattttgtctttgtg 323
Query: 123 cagactttatagagacgcctacacagatataggtggaagagcttaccacgccctcgccta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagactttatagagacgcctacacagatataggtggaagagcttaccacgccctcgccta 383
Query: 183 tgtgcacagcttatgggagtgctattgtatatagtgagttgcttatgtaaacagtgttgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgcacagcttatgggagtgctattgtatatagtgagttgcttatgtaaacagtgttgt 443
Query: 243 ttttctacaactcatagctatgttttatgatttgtgtggggtgaagaaagagaaagatag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttctacaactcatagctatgttttatgatttgtgtggggtgaagaaagagaaagatag 503
Query: 303 aaagggagaaaacaaatacattatctccatggattagactaggtgaggagaagaaacaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagggagaaaacaaatacattatctccatggattagactaggtgaggagaagaaacaag 563
Query: 363 atgtataaaatgcaacagaaaatagagccgtaacacactggggttgatatcaaaacaaaa 422
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 564 atgtataaaatgcaacagaaaatagtgccgtaacacactggggttaatatcaaaacaaaa 623
Query: 423 ctacatggtgttg-----------------aaaaaaaaaaaaagattaagaaattctgtc 465
||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 624 ctacacggtgttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaagattaagaaattctgtc 683
Query: 466 tcagggtttcttcctgacttagaccatttatattcccagatgaaacaaacacacacacac 525
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 684 tcagggtttcttcctgacttagaccatttatattcc-agatgaaacacacacacacacac 742
Query: 526 acacacac 533
||||||||
Sbjct: 743 acacacac 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 935
Length adjustment: 10
Effective length of query: 523
Effective length of database: 925
Effective search space: 483775
Effective search space used: 483775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_l11.g1 MSMg01no117_l11.g1 CHROMAT_FILE:
MSMg01no117_l11.g1 PHD_FILE: MSMg01no117_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:21 2005
(639 letters)
>mm_chr10_102475067_102476106
Length = 1040
Score = 1214 bits (628), Expect = 0.0
Identities = 637/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 1 ttataaaagaagagcttaagtccacaggaaatgaataaaattaaagctgttgggattagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ttataaaagaagagcttaagtccacaggaaatgaataaaattaaagctgttgggattagg 781
Query: 61 aagtgggactcaagaagggcttcctcatttcagttgatttttaaaatagcactgtaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aagtgggactcaagaagggcttcctcatttcagttgatttttaaaatagcactgtaaatt 721
Query: 121 atcactatcattttaatatagatcacatgagctgatactatacacttaaacagtaagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atcactatcattttaatatagatcacatgagctgatactatacacttaaacagtaagtac 661
Query: 181 ctttaaaatgcatctgtgatgcaaaataggtatggatgacaaacccctgcatgtaagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctttaaaatgcatctgtgatgcaaaataggtatggatgacaaacccctgcatgtaagtat 601
Query: 241 ggataacaagatacaggaatatgaatctgatttttgttatgattatacctgtggtgattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggataacaagatacaggaatatgaatctgatttttgttatgattatacctgtggtgattt 541
Query: 301 agatttaaagccataaacacaattaaatatattagttcatctagttcccatttt-aaaaa 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 540 agatttaaagccataaacacaattaaatatattagttcatctagttcccattttaaaaaa 481
Query: 360 accatacctgaagaaattaatttgtttacatctcacattcttagtagctttataatcaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 accatacctgaagaaattaatttgtttacatctcacattcttagtagctttataatcaat 421
Query: 420 caatatattttatggtgtcttattatttatttttgtagggtaggatatggaaatagttac 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caatatattttatggtatcttattatttatttttgtagggtaggatatggaaatagttac 361
Query: 480 aatcaataatcactcgatagtctattaaatggtacagcctatgaactataaagttgggag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aatcaataatcactcgatagtctattaaatggtacagcctatgaactataaagttgggag 301
Query: 540 tatgcataagtaaataagcaattataacttacttataaaggtagtagccacattccctta 599
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tatgcataaataaataagcaattataacttacttataaaggtagtagccacattccctta 241
Query: 600 gaatttctttagatttctttgggttagatttgaccttaca 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaatttctttagatttctttgggttagatttgaccttaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
