Query= MSMg01no119_f18.b1 MSMg01no119_f18.b1 CHROMAT_FILE:
MSMg01no119_f18.b1 PHD_FILE: MSMg01no119_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:29 2005
(445 letters)
>mm_chr10_38053227_38054071
Length = 845
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 3/363 (0%)
Strand = Plus / Minus
Query: 4 gaattcaatatattgc-tttgtctgcagccaagggctgcatcaggtgagaggagcagggt 62
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaattcaatata-ggcatttgtctgcagccaagggctgcatcaggtgagaggagcagggt 304
Query: 63 ttaaaaaaaacagatgttagaataattcttagctcaagtagatttatactgtgcatggtt 122
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttaaaaaaaacagatgttagaaaaattcttagctcaagtagatttatactgtgcatggtt 244
Query: 123 cccagaagtaagtatggtaagtatacaaatggcatgagaaagatagagagagaataggtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cccagaagtaagtatggtaagtatacaaatggcatgagaaagatagagagagaataggtc 184
Query: 183 tcagaaaagcagttgtcccctgactggaatgcattagt-aaagagaaggaaaatggatat 241
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 183 tcagaaaagcagttgtcccctgactggaatgcattagtaaaagagaaggaaaatggatat 124
Query: 242 aagctatctcagagatctcctagggacaggaggatatcagaagatgtcctgcttcttttc 301
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 123 aagctatctcagagatctcctagggacaggaggaaatcagaagatgtcctgcttcttttc 64
Query: 302 tggctcctaccggagatatccttagttcaagttatatttaggtccctttaggacatcaag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tggctcctaccggagatatccttagttcaagttatatttaggtccctttaggacatcaag 4
Query: 362 ttc 364
|||
Sbjct: 3 ttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_f18.g1 MSMg01no119_f18.g1 CHROMAT_FILE:
MSMg01no119_f18.g1 PHD_FILE: MSMg01no119_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:29 2005
(428 letters)
>mm_chr10_37888084_37888911
Length = 828
Score = 812 bits (420), Expect = 0.0
Identities = 426/428 (99%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 1 tagactacaaatgtttaatcctatattcaaagagatttaattgtgattagaaaaggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagactacaaatgtttaatcctatattcaaagagatttaattgtgattagaaaaggagat 260
Query: 61 aagcaagaaaataagatacaagtcagaatgactgaatgaatggagatatgttcccaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcaagaaaataagatacaagtcagaatgactgaatgaatggagatatgttcccaacat 320
Query: 121 gaataaatgacagtatatgaccttgtgataagtcataaagagaaataaaagtagcaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaataaatgacagtatatgaccttgtgataagtcataaagagaaataaaagtagcaattt 380
Query: 181 ccaaatatttgcacttaggcaaatctatacaagtgtcaaagagaatgttctaggatagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaatatttgcacttaggcaaatctatacaagtgtcaaagagaatgttctaggatagca 440
Query: 241 attcttaacaatgacatgtaggcttagattttttttaaaacccactttaataaggcttct 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 attcttaacaatgacatgtaggcttagattttttt-aaaacccactttaataaggcttct 499
Query: 301 caaatgctgcttctccccttctagcccactgtccaaagctaggggagaaaagagggcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caaatgctgcttctccccttctagcccactgtccaaagctaggggagaaaagagggcaaa 559
Query: 361 cataacaaaggaatgtagacctgtttcgaagtagttctttgggacaattacaatctccat 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagaacaaaggaatgtagacctgtttcgaagtagttctttgggacaattacaatctccat 619
Query: 421 ttttcagg 428
||||||||
Sbjct: 620 ttttcagg 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
